Table 3.
Estimated number of participants (N), death proportion, median survival, and HR per SD decrease detectable with 80% power for each cancer site
Cancer | N | Death proportion | Median survival (months) | HRs detectable at estimated 80% power | |
PD-1 | PD-L1 | ||||
Breast | 93 869 | 0.083 | 64.871 | HR ≥ 1.21 HR ≤ 0.83 |
HR ≥ 1.17 HR ≤ 0.86 |
Colorectal | 19 154 | 0.238 | 38.471 | HR ≥ 1.28 HR ≤ 0.78 |
HR ≥ 1.22 HR ≤ 0.82 |
Head and neck | 10 196 | 0.331* | 54.372 | HR ≥ 1.34 HR ≤ 0.75 |
HR ≥ 1.26 HR ≤ 0.79 |
Lung | 8670 | 0.599* | 3.671 | HR ≥ 1.27 HR ≤ 0.79 |
HR ≥ 1.21 HR ≤ 0.83 |
Melanoma | 11 201 | 0.103 | 53.473 | HR ≥ 1.63 HR ≤ 0.62 |
HR ≥ 1.50 HR ≤ 0.67 |
Ovarian | 3395 | 0.552* | 30.174 | HR ≥ 1.48 HR ≤ 0.68 |
HR ≥ 1.37 HR ≤ 0.73 |
Prostate | 24 023 | 0.146 | 62.471 | HR ≥ 1.33 HR ≤ 0.75 |
HR ≥ 1.26 HR ≤ 0.79 |
HRs per standard deviation (SD) decrease estimated to be detected at 80% power calculated with the survSNP R package75 (https://cran.r-project.org/web/packages/survSNP/index.html) using the combined estimated sample size and death proportion from each cancer survival genome-wide association study (GWAS) and the respective Genomics England cancer survival GWAS, median survival and assuming a false positive rate of 0.05. Death proportion was defined as the proportion of cancer cases who died due to all-cause or cancer-specific mortality. Transformation of protein level measurements into normalised protein expression (NPX) units on a log₂ scale have been described previously.43
*Death proportion due to all-cause mortality.