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. 2024 Feb 15;14(2):e075981. doi: 10.1136/bmjopen-2023-075981

Table 5.

Estimated number of tissue samples with germline genotype and gene expression data (N) available from The Cancer Genome Atlas Program (TCGA) dataset (https://www.cancer.gov/tcga) for each cancer site

Cancer site Study name Study abbreviation N
Breast Breast invasive carcinoma BRCA 770
Colorectal Colon adenocarcinoma COAD 298
Rectum adenocarcinoma READ 109
Total 407
Head and neck Head and neck squamous cell carcinoma HNSC 366
Lung Lung adenocarcinoma LUAD 385
Lung squamous cell carcinoma LUSC 334
Total 719
Melanoma Skin cutaneous melanoma SKCM 54
Ovarian Ovarian serous cystadenocarcinoma OV 211
Prostate Prostate adenocarcinoma PRAD 366