TABLE 2.
Sequence similarity of excised DNA fragments
| Band no.a | Database match with accession no. in parentheses | % Similarity | Phylogenetic group |
|---|---|---|---|
| BSD-S1 | Chryseobacterium sp. (AY244770) | 96 | Flavobacteria |
| BSD-S2 | Pseudomonas aeruginosa (X06684) | 99 | γ-Proteobacteria |
| BSD-S4 | Syntrophus buswellii (X85131) | 99 | δ-Proteobacteria |
| BSD-S5 | Desulfotomaculum sp. 175 (AF295656) | 95 | Firmicutes |
| BSD-S6 | Pseudomonas aeruginosa (X06684) | 99 | γ-Proteobacteria |
| BSD-S8 | Syntrophus buswellii (X85131) | 99 | δ-Proteobacteria |
| BSD-S12 | Syntrophus buswellii (X85131) | 99 | δ-Proteobacteria |
| BSD-S13 | Desulfotomaculum sp. 175 (AF295656) | 100 | Firmicutes |
| BSD-S14 | Desulfobulbus elongatus (X95180) | 98 | δ-Proteobacteria |
| BSD-S15 | Desulfobulbus rhabdoformis (U12253) | 98 | δ-Proteobacteria |
| BSD-S16 | Desulfobulbus propionicus (AY548789) | 95 | δ-Proteobacteria |
| BSD-S17 | Sulfate-reducing bacterium R-ButA1 (AJ012596) | 100 | δ-Proteobacteria |
| BSD-S19 | Uncultured Desulfosarcina sp. (AY177791) | 98 | δ-Proteobacteria |
| BSD-S20 | Desulfovibrio aminophilus (AF067964) | 96 | δ-Proteobacteria |
| BSD-S23 | Desulfovibrio longus (AY359867) | 98 | δ-Proteobacteria |
| BSD-S24 | Desulfovibrio indonesiensis (Y09504) | 100 | δ-Proteobacteria |
| BSD-S25 | Desulfovibrio sp. Met 82 (AY062930) | 100 | δ-Proteobacteria |
| BSD-S26 | Desulfovibrio aminophilus (AF067964) | 100 | δ-Proteobacteria |
| BSD-S27 | Flavobacterium-like sp. (AY353822) | 97 | Flavobacteria |
| BSD-S29 | Uncultured bacterial clone TDC-S1 (AF447150) | 99 | Unknown |
| BSD-S30 | Flavobacterium-like sp. (AY353822) | 95 | Flavobacteria |
| BSD-S31 | Uncultured bacterium SJA-152 (AJ009496) | 99 | unknown |
| BSD-S32 | Desulfotomaculum sp. 175 (AF295656) | 96 | Firmicutes |
| BSD-S33 | Uncultured Desulfotomaculum sp. (AY261820) | 97 | Firmicutes |
| BSD-S34 | Desulfotomaculum sp. OX39 (AJ577273) | 95 | Firmicutes |
| BSD-S35 | Uncultured Desulfosarcina (AY177788) | 98 | δ-Proteobacteria |
| BSD-S36 | Uncultured δ-proteobacterium (AJ240977) | 99 | δ-Proteobacteria |
| BSD-S37 | Desulfonema ishimotonii (U45991) | 98 | δ-Proteobacteria |
| BSD-S38 | Desulfonema ishimotonii (U45991) | 96 | δ-Proteobacteria |
| BSD-S39 | Desulfovibrio alcoholivorans (AF053751) | 94 | δ-Proteobacteria |
| BSD-S40 | Desulfovibrio fructosivorans (AF050101) | 95 | δ-Proteobacteria |
| BSD-S41 | Desulfovibrio burkinensis (AF053752) | 97 | δ-Proteobacteria |
| BSD-S42 | Desulfovibrio sp. BG6 (U85468) | 98 | δ-Proteobacteria |
| BSD-S43 | Desulfovibrio fructosivorans (AF050101) | 95 | δ-Proteobacteria |
| BSD-S44 | Desulfovibrio sp. BG6 (U85468) | 98 | δ-Proteobacteria |
| BSD-S45 | Desulfovibrio indonesiensis (Y09504) | 95 | δ-Proteobacteria |
| BSD-S46 | Desulfovibrio sp. BG6 (U85468) | 96 | δ-Proteobacteria |
a
Bands BSD-S1 to BSD-S46 are the same bands as S1 to S46 in the denaturing gradient gel (Fig. 2), BSD-S1 to BSD-S28 were obtained from bioreactor BSD1, and BSD-S29 to BSD-S46 were obtained from bioreactor BSD2.