Table 2.

Sequence recovery on TS50 dataset. The same training set as used by GVP-GNN was used for evaluation on TS50, as there is no standard training set for this dataset. We retrained ProteinMPNN using the same training set and its open-source code [31].

Method	Sequence Recovery (%)
DIProT	54.4
DenseCPD [25]	50.7
ProteinMPNN [11]	48.0
GVP-GNN [22]	44.9
ProDCoNN [26]	40.7
SPROF [27]	39.2
SPIN2 [28]	33.6
SPIN [29]	30.3
Rosetta [30]	30.0