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. 2005 Apr;17(4):1105–1119. doi: 10.1105/tpc.104.027474

Table 2.

Genes Downregulated in RL-BK Overexpressing Plants as Identified by Microarray Analysis

Experiment 1 (Transgenic Line L1)a
Experiment 2 (Transgenic Line L3)b
Genec AGI Code Ratio (±sd)d P Value 1e P Value 2e Ratio (±sd)d P Value 1e P Value 2e
Unknown protein AT5G64770 0.12 (0.04) 4.7E-26 1.3E-23 0.19 (0.00) 1.2E-21 1.5E-21
Auxin-induced protein-like AT5G18020 0.16 (0.02) 2.5E-22 2.7E-21 0.22 (0.04) 1.3E-20 5.3E-17
Thionin, putative AT1G66100 0.17 (0.00) 1.5E-21 1.2E-19 0.24 (0.00) 8.0E-18 3.7E-17
GAST1-like protein AT1G74670 0.17 (0.02) 3.0E-25 2.5E-23 0.18 (0.02) 2.0E-24 5.1E-23
Fructose-bisphosphate aldolase-like protein AT4G26530 0.18 (0.04) 2.5E-25 5.8E-22 0.23 (0.01) 1.3E-20 4.5E-20
Expansin, putative AT2G40610 0.19 (0.03) 2.7E-24 1.1E-21 0.16 (0.01) 3.7E-25 3.3E-24
Auxin-induced protein, putative AT1G29500 0.21 (0.07) 1.3E-23 1.6E-17 0.27 (0.05) 1.2E-18 1.4E-15
Expressed protein AT4G18970 0.25 (0.03) 4.9E-21 9.9E-19 0.25 (0.02) 1.3E-20 5.0E-19
Early auxin-induced protein, IAA19 AT3G15540 0.26 (0.12) 1.3E-17 1.1E-11 0.41 (0.03) 7.0E-11 8.5E-09
Auxin-induced protein-like AT5G18030 0.29 (0.03) 1.1E-17 1.7E-15 0.29 (0.04) 4.7E-18 1.4E-14
Expressed protein AT5G52900 0.31 (0.05) 5.0E-18 1.4E-14 0.39 (0.03) 2.7E-13 1.3E-11
Expressed protein AT1G32080 0.31 (0.00) 4.2E-16 8.3E-16 0.37 (0.00) 2.0E-13 2.7E-13
Auxin-induced protein (SAUR), putative AT5G18010 0.32 (0.04) 1.1E-15 5.5E-13 0.38 (0.02) 1.9E-12 3.4E-11
myb-related transcription factor mixta, putative AT1G18710 0.32 (0.02) 4.6E-15 5.9E-13 0.44 (0.08) 3.1E-11 1.6E-07
Putative auxin-induced protein AUX2-11 AT1G04240 0.33 (0.03) 3.8E-16 9.4E-14 0.42 (0.02) 1.8E-11 2.4E-10
Putative protein AT5G11420 0.33 (0.05) 5.5E-17 9.4E-14 0.34 (0.04) 3.7E-16 2.1E-13
Auxin-induced protein-like AT5G18060 0.33 (0.06) 3.0E-16 2.2E-13 0.37 (0.03) 8.2E-15 3.1E-14
Auxin-induced protein-like AT5G18080 0.33 (0.15) 1.1E-19 2.2E-09 0.38 (0.10) 9.7E-15 3.0E-09
Methyladenine glycosylase family protein AT5G44680 0.34 (0.16) 5.8E-17 4.5E-13 0.37 (0.03) 3.1E-14 2.7E-12
a

Experiment 1: downregulated genes in untreated RL-BK line L1 (L1/control).

b

Experiment 2: downregulated genes in untreated RL-BK line L3 (L3/control).

c

Genes with ratio (untreated RL-BK transgenic plants/untreated VC plants) of <0.35 are listed.

d

Values represent the means of two replicates. sd, standard deviations of two replicates.

e

P values of two replicates. P values < 0.005 were studied.