Table II.
Autonomous and vernalization pathway genes (activators and repressors of FLC)
–, Sequence not identified.
| Name
|
Arabidopsis Gene
|
Pea
|
Medicago
|
Soybean EST
|
Lotus EST
|
||
|---|---|---|---|---|---|---|---|
| Gene | %a | Genomic | EST | ||||
| FCA | AT4G16280 | PsFCAb (AY805329) | 41% (FL) | AC135100bc | BG449291bc | CB063363 | BP034279 |
| FY | AT5G13480 | – | – | TC84839 | TC17965 | TC19740 | |
| FLD | AT3G10390 | PsFLD (AY830930) | 86% (P: 31%) | – | AW586703f | TC187859 | AV777759 |
| FVE | AT2G19520 | PsFVEb (AY830931) | 76% (FL) | AC121243bc | TC87417bcd | TC227037 | BP058734d |
| FPA | AT2G43410 | PsFPAb (AY830932) | 72% (P: 98%) | – | TC84230d | – | TC19296d |
| LD | AT4G02560 | PsLDb (AY826732) | 38% (P: 75%) | – | TC91556 | AW569075d | – |
| FLK | AT3G04610 | – | – | TC89387d | TC176909 | TC13879d | |
| VIN3 | AT5G57380 | – | – | – | – | TC9019 | |
| VRN1 | AT3G18990 | PsVRN1ae (AY830928) | 67% (P: 15%) | AC137825bef | TC78901bef | TC229117ce | TC15957 |
| PsVRN1be (AY830929) | 75% (P: 15%) | TC76370c | TC220172e | ||||
| FRL1 | AT5G16320 | – | AC121232b | – | – | – | |
| FRL2 | AT1G31814 | – | AC137079b | – | – | – | |
| VIP3 | AT4G29830 | – | – | TC82282 | TC178641 | TC10222 | |
| VIP4 | AT5G61150 | – | – | TC87729 | TC176048 | – | |
| ESD4 | AT4G15880 | – | AC147012bc | TC79449bc | TC199514 | TC13506 | |
| PIE1 | AT3G12810 | – | – | – | TC194085 | AV776810 | |
a
Identity percentage at the amino acid level; (FL), full-length cDNA; (P), partial cDNA: percentage of Arabidopsis cDNA.
b
Map position available.
c
Medicago genomic and EST sequences correspond to the same gene.
d
Several EST sequences available corresponding to the same gene; see Supplemental Table VI for other accession numbers.
e
Multiple distinct sequences corresponding to a single Arabidopsis gene.
f
Exact relationship to Arabidopsis gene unclear.