Table 1.
Gene list sorted by signal pathways included in the Codeset-designed panel for the NanoString nCounter.
| Cell Cycle | PI3K Signalling Pathway | MAPK Pathway | WNT Signalling Pathway | Growth Factors | TGF-β | Fibroblast Markers |
|---|---|---|---|---|---|---|
| CDK1 | PIK3C3 | MAP2K1 | CTNNB1 | EGFR | TGFB1 | ACTA2 |
| CDK2 | ATG14 | KRAS | Wnt1 | TGFA | TGFBR1 | FAP |
| CDK4 | PIK3R5 | MAPK1 | Wnt2 | EGFR | TGFBR2 | FN1 |
| CDK6 | PIK3R4 | BRAF | CD47 | HGF | CD44 | |
| MDM2 | PIK3R1 | CHRM3 | CD274 | FGF1 | SMAD4 | |
| TP53 | PIK3CA | HRAS | ABCB1 | VEGFA | SMAD2 | |
| WEE1 | RPS6KB1 | NRAS | Wnt3 | FLT1 | SMAD7 | |
| Myt1 | BECN1 | ARAF | FZD10 | FLT4 | MYC | |
| CDKN2A | AKT1 | SOS1 | FZD2 | KDR | ||
| CDKN1B | MTOR | SOS2 | FZD5 | PDGFB | ||
| CDKN1A | PTEN | NF1 | IGF1 | |||
| CCND1 | RICTOR | MAP2K2 | VEGFC | |||
| CCNA2 | RPTOR | RAF1 | MET | |||
| CCNB3 | ||||||
| CCNE1 |