Table 2.

Single large, annotated genes in CmTU1867 that are annotated as two or three distinct sequential genes in CpBGF and/or other Cryptosporidium spp.

Chr	Gene ID	Protein in CmTU1867	Gene IDs in CpBGF
1	cmbei_100150 cmbei_100730 cmbei_1002800	Uncharacterized secreted protein (SKSR gene family) Glutamine cyclotransferase domain containing protein Methyltransferase TRM13, MED7, Zinc finger domain-containing protein	cpbgf_100150	cpbgf_100160
			cpbgf_100730	cpbgf_100733
			cpbgf_1002800	cpbgf_1002810
2	cmbei_20010	SFI domain containing protein	cpbgf_20010	cpbgf_200470
3	cmbei_3002310 cmbei_3002700	RNA recognition motif and AAA-type ATPase core domain containing protein Transport protein particle (TRAPP) domain containing protein	cpbgf_3002310	cpbgf_3002300	cpbgf_3002290
			cpbgf_3002700	cpbgf_3002706
4	cmbei_4002100 cmbei_4002180	PIG-A GPI anchor and glucosyltransferase domain containing protein Peptidase A1 and Dpy-19/Dpy19-like domain-containing protein	cpbgf_4002100	cpbgf_4002093
			cpbgf_4002180	cpbgf_4002190
5	cmbei_500340 cmbei_500470 cmbei_5002280 cmbei_5002830 cmbei_5004500 cmbei_5003110	Signal peptide containing protein Peptidase S9, prolyl oligopeptidase, catalytic domain containing protein Signal peptide and transmembrane domain containing protein Vacuolar protein sorting-associated protein 13 domain containing protein Vacuolar protein sorting-associated protein 13 AAA+ ATPase and VWFA domain containing protein	cpbgf_500340	cpbgf_500350
			cpbgf_500470	cpbgf_500466
			cpbgf_5002280	cpbgf_5002290
			cpbgf_5002830	cpbgf_5002840
			cpbgf_5004500	cpbgf_5004490	cpbgf_5004480
			cpbgf_5003110	cpbgf_5005540
6	cmbei_600540 cmbei_6001250 cmbei_6002100 cmbei_6002140	Serine/threonine protein kinase domain containing protein Uncharacterized protein Uncharacterized protein Potassium channel domain containing protein	cpbgf_600540	cpbgf_600530
			cpbgf_6001250	cpbgf_6001260
			cpbgf_6002100	cpbgf_6002110
			cpbgf_6002140	cpbgf_6002143
7	None
8	cmbei_800690 cmbei_8002510	Signal peptide containing putative Formin J protein Putative cyclin dependent kinase	cpbgf_800690	cpbgf_800680
			cpbgf_8002510	cpbgf_8002500