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. 2024 Feb 24;15:1701. doi: 10.1038/s41467-024-45884-x

Fig. 5. Adaptive genomic regions physically colocalize in Verticillium dahliae.

Fig. 5

All circular plots display in the outer track the eight chromosomes of V. dahliae with centromeres highlighted in yellow, adaptive genomic regions (AGRs) in blue, and core regions in white. Long-range interactions in V. dahliae strain JR2 (a) and VdLs17 (d) that exceed the average interaction strength of centromeres are shown as edges. Edges for centromeric interactions are shown in yellow, AGR interactions in blue, and core interactions in gray. Noncentromeric long-range interactions in V. dahliae strains JR2 (b) and VdLs17 (e) are shown as edges and the gene density (10 kb) is shown in black. For V. dahliae strain JR2, the inner tracks depicting histone modification densities. From outside to inside: H3K27ac (green), H3K27me3 (yellow), H3K4me2 (purple), and H3K9m3 (blue). c, f Edges represent segmental duplications. Source data are provided as a Source Data file 5.