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. 2024 Jan 17;25(2):813–831. doi: 10.1038/s44319-023-00055-9

Table 1.

Yeast strains used in this study.

Name Genotype Background Source
BY4741 his3∆1 leu2∆0 met15∆0 ura3∆0; Mat a BY474x Euroscarf
yABH1 pho8::pho8∆60:His ATG13wt:Ura; Mat alpha BY474x This study
yABH2 pho8::pho8∆60:His ATG13CD:Ura; Mat alpha BY474x This study
yABH3 pho8::pho8∆60:His ATG1344D:Ura; Mat alpha BY474x This study
yABH6 pho8::pho8∆60:His ATG13NA:Ura; Mat alpha BY474x This study
yABH7 pho8::pho8∆60:His ATG13ND:Ura; Mat alpha BY474x This study
yABH8 pho8::pho8∆60:His ATG13CA:Ura; Mat alpha BY474x This study
yABH11 ATG13wt:Ura; Mat a BY474x This study
yABH17 pho8::pho8∆60:His ATG1344A:Ura; Mat alpha BY474x This study
yABH25 ATG1344D:Ura; Mat a BY474x This study
yABH26 ATG1344A:Ura; Mat a BY474x This study
yABH59 pho8::pho8∆60:His ATG138SA:Ura; Mat alpha BY474x This study
yABH60 pho8::pho8∆60:His ATG138SD:Ura; Mat alpha BY474x This study
yABH62 pho8::pho8∆60:His ATG13MA:Ura; Mat alpha BY474x This study
yABH63 pho8::pho8∆60:His ATG13MD:Ura; Mat alpha BY474x This study
yABH73 pho8::pho8∆60:His atg1::Kan atg11::Hyg atg13::Kan; Mat a BY474x This study
yABH76 pho8::pho8∆60:His ATG13379D:Ura; Mat alpha BY474x This study
yABH78 pho8::pho8∆60:His ATG13428D429D:Ura; Mat alpha BY474x This study
yABH79 pho8::pho8∆60:His ATG13429D:Ura; Mat alpha BY474x This study
yABH80 pho8::pho8∆60:His ATG13428A429A:Ura; Mat alpha BY474x This study
yABH81 pho8::pho8∆60:His atg11::Nat ATG13379D:Ura; Mat a BY474x This study
yABH86 pho8::pho8∆60:His atg11::Nat ATG13wt:Ura; Mat a BY474x This study
yABH90 atg8::His atg13::Kan atg19::Hyg; Mat a BY474x This study
yABH91 atg8::Kan atg13::Nat atg17::His atg19::Kan; Mat a BY474x This study
yCK416 atg11:Kan; Mat a BY474x (Pfaffenwimmer et al, 2014)
yCK418 atg13::Kan; Mat a BY474x This study
yDH11 pho8::pho8∆60:His; Mat alpha BY474x This study
yDH516 pho8::pho8∆60:His atg13::Kan atg1::Kan; Mat alpha BY474x This study
yDP441 atg1::Kan atg13::Nat atg19::Kan; Mat a BY474x This study
yDP445 atg13::Nat atg19::Kan; Mat a BY474x This study
yDP451 atg19::Hyg; Mat a BY474x This study
yDP454 atg1::Kan atg11::Hyg atg13::Nat atg19::Kan; Mat a BY474x This study
yRT15 Atg1-stag(protA-speptide):His atg13::Nat atg17-13myc:Kan Vac8-HA:Kan; Mat a BY474x This study
yRT70 atg1::Kan atg11::Hyg atg13::Kan; Mat alpha BY474x (Torggler et al, 2016)
yRT105 atg1::His atg13::Nat; Mat alpha BY474x This study
yRT199 pho8::pho8∆60:His atg1::Kan; Mat a BY474x This study
yRT238 atg13::Kan pep4∆::Nat; Mat a BY474x This study
ySS15 pho8::pho8∆60:His atg13::Kan; Mat alpha BY474x This study
ySS22 pho8::pho8∆60:His atg13::Kan atg11::Nat; Mat a BY474x This study
ySS24 pho8::pho8∆60:His atg13::Kan atg17::His; Mat a BY474x This study
ySS31 pho8::pho8∆60:His atg13::Kan atg19::Kan; Mat alpha BY474x This study
yTP210 Atg1-stag(protA-speptide):His atg13::Nat; Mat alpha BY474x (Torggler et al, 2016)

Description: Atg13 constructs were genomically integrated by homologous recombination into the atg13::Kan locus in the following BY474x strains:

pho8::pho8∆60:His atg13::Kan (ySS15) or atg13::Kan (yCK418).