REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Anti-mouse PD-L1 antibody | Bio X Cell | Cat#BE0361; RRID:AB_2927503 |
Anti-mouse SLC7A11 antibody | Proteintech | Cat#26864-1-AP; RRID:AB_2880661 |
Anti-mouse MerTK antibody | SAB Signalway Antibody | Cat#32851 |
Anti-mouse p-MerTK antibody | SAB Signalway Antibody | Cat#13320 |
Anti-mouse ki67 antibody | Abcam | Cat# ab92742; RRID:AB_10562976 |
Anti-mouse CD3 antibody | Abcam | Cat#ab16669; RRID:AB_443425 |
Anti-mouse CD8 antibody | Abcam | Cat#ab237709; RRID:AB_2892677 |
Anti-mouse CD11b antibody | Abcam | Cat#ab52478; RRID:AB_868788 |
Anti-mouse Gr1 antibody | Abcam | Cat#ab25377; RRID:AB_470492 |
Anti-mouse ERK 1/2 antibody | Cell Signaling Technology | Cat#9102; RRID:AB_330744 |
Anti-mouse p-ERK1/2 (T202/Y204) antibody | Cell Signaling Technology | Cat#4370; RRID:AB_2315112 |
Anti-mouse SP1 antibody | Proteintech | Cat#21962-1-AP; RRID:AB_10898171 |
Anti-mouse p-SP1 (T453) antibody | Abcam | Cat#ab59257; RRID:AB_946335 |
Anti-human CD15 antibody | Abcam | Cat#ab135377 |
Anti-human CD14 antibody | Abcam | Cat#ab133335; RRID:AB_2889158 |
Anti-human CD11b antibody | Abcam | Cat#ab133357; RRID:AB_2650514 |
Anti-mouse β-actin antibody | Proteintech | Cat#60008-1-Ig; RRID:AB_2289225 |
Anti-mouse IgG antibody | Bio X Cell | Cat#BE0089; RRID:AB_1107769 |
Anti-human HRP secondary antibody | Yuanxibio | Cat#A10011-60 |
BUV395 anti-mouse CD45 antibody | BD Biosciences | Cat#564279; RRID:AB_2651134 |
PE/cy7 anti-mouse CD3 antibody | BioLegend | Cat# 100219; RRID:AB_1732068 |
BV/785 anti-mouse CD4 antibody | BioLegend | Cat#100552; RRID:AB_2563053 |
BV/510 anti-mouse CD8 antibody | BioLegend | Cat#100752; RRID:AB_2563057 |
Bv421 anti-mouse IFN-γ antibody | BioLegend | Cat#505829; RRID:AB_10897937 |
PE anti-mouse CD11b antibody | BioLegend | Cat#101208; RRID:AB_312791 |
FITC anti-mouse Ly6G antibody | BioLegend | Cat#127606; RRID:AB_1236494 |
Bv421 anti-mouse Ly6C antibody | BioLegend | Cat# 128031; RRID: AB_2562177 |
Percp/cy5.5 anti-mouse Gr1 antibody | BioLegend | Cat#108428; RRID:AB_893558 |
APC anti-mouse F480 antibody | BioLegend | Cat#123115; RRID:AB_893493 |
Bacterial and virus strains | ||
Escherichia coli | Tsingke | Cat# Tsingke-001 |
Biological samples | ||
Human PAAD tissue microarrays | Huashan Hospital | N/A |
Chemicals, peptides, and recombinant proteins | ||
Sitravatinib | MCE | Cat#HY-16961 |
SYBR | TaKaRa | Cat#RR067A |
Red blood cell lysis buffer | Tiangen | Cat#RT122-01 |
CFSE | Invitrogen | Cat# 65-0850-84 |
BODIPY 581/591 C11 | Invitrogen | Cat# D3861 |
Pkh67 Green Fluorescent Cell Linker Kit | Sigma-Aldrich | Cat# PKH67GL |
Propidium iodide | Invitrogen | Cat#P1304MP |
SYTOX Green | Invitrogen | Cat#S7020 |
Critical commercial assays | ||
IFN-γ ELISA Kit | R&D Systems | Cat# MIF00 |
CSF3 ELISA Kit | R&D Systems | Cat# MCS00 |
Tumor Dissociation Kit | Miltenyi Biotec | Cat#130-096-730 |
Cell Counting Kit-8 | Dojindo | Cat#CK04-11 |
MDSCs Isolation Kit | Miltenyi Biotec | Cat#130-094-538 |
Zombie NIRTM Fixable Viability Kit | BioLegend | Cat#423105 |
Critical commercial assays | ||
Lipid Peroxidation MDA Assay Kit | Beyotime | Cat#S0131S |
Deposited data | ||
Raw and analyzed expression profiling by array | https://www.ncbi.nlm.nih.gov/geo/ | GEO: GSE76427 |
Raw and analyzed expression profiling by array | https://www.ncbi.nlm.nih.gov/geo/ | GEO: GSE36376 |
Proteomics data | This paper; iProX Data | iProX: IPX0007790000 |
Experimental models: Cell lines | ||
Human: 293T | Institute of Biochemistry and Cell Biology, Chinese Academy of Science (Shanghai China | Cat# SCSP-502 |
Human: HepG2 | Institute of Biochemistry and Cell Biology, Chinese Academy of Science (Shanghai China | Cat# SCSP-510 |
Human: Hep3B | Institute of Biochemistry and Cell Biology, Chinese Academy of Science (Shanghai China) | Cat# SCSP-5045 |
Human: Huh7 | Institute of Biochemistry and Cell Biology, Chinese Academy of Science (Shanghai China) | Cat# SCSP-526 |
Human: MHCC97-H | Liver Cancer Institute, University of Fudan University, China | N/A |
Human: HCC-LM3 | Liver Cancer Institute, University of Fudan University, China | N/A |
Mouse: Hepa1-6 | Institute of Biochemistry and Cell Biology, Chinese Academy of Science (Shanghai China | Cat# SCSP-512 |
Experimental models: Organisms/strains | ||
Mouse: C57BL/6 | Beijing Vital River Laboratory | Cat#219 |
Mouse: C3H | Beijing Vital River Laboratory | Cat#212 |
Oligonucleotides | ||
shRNA target sequences for SLC7A11/MerTK, see Table S1 | This paper | N/A |
SLC7A11/MerTK cDNA clone, see Table S1 | This paper | N/A |
PCR primers for β-actin/SLC7A11/MerTK/Csf1/Csf2/Csf3/Cxcl1/Cxcl2, see Table S1 | This paper | N/A |
Recombinant DNA | ||
pCDH-CMV-MCS-EF1-puro | Ke Lei Biological Technology | Cat# kl-zl-0287-01 |
psPAX | Ke Lei Biological Technology | Cat#12260-20ul |
pMD2.G | Ke Lei Biological Technology | Cat#12259-20ul |
pLKO.1-Puro | Ke Lei Biological Technology | Cat#kl-zl-0961-01 |
pCMV-Gag-pol | Ke Lei Biological Technology | Cat# kl-zl-0178-01 |
VSVG | Ke Lei Biological Technology | Cat# kl-zl-0955-01 |
Software and algorithms | ||
Prism 9.0.0 | GraphPad Software | https://graphpad.com/scientific software/prism/ |
RStudio (v1.4.1106) | RStudio | https://www.rstudio.com/ |
TIMER2.0 | Dana Farber Cancer Institute | http://timer.cistrome.org/ |
FlowJo v10.7.2 | BD Biosciences | https://www.flowjo.com/solutions/flowjo/downloads |
Fiji | ImageJ | https://imagej.net/software/fiji/ |
SlideViewer | 3DHISTECH | https://www.3dhistech.com/ |