Table 2.
Overview of the draft germline genome assemblies of Strombidium cf. sulcatum (present study), Halteria grandinella (present study), Oxytricha trifallax (Chen et al. 2014) and Euplotes vannus (Chen et al. 2019)
| S. cf. sulcatum | H. grandinella | O. trifallax | E. vannus | |
|---|---|---|---|---|
| Assembly size [Mb] | 135 | 225 | 496 | 120 |
| Contigs number | 44,899 | 117,978 | 25,720 | 104,988 |
| GC content [%] | 52.0 | 42.4 | 28.4 | 36.0 |
| N50 [bp] | 5331 | 2849 | 27,807 | 2566 |
| Size (with MDS) [Mb] | 65.7 | 80.0 | 216.2 | 78.9 |
| N50 (with MDS) [bp] | 3862 | 3709 | 45,630 | 3702 |
| Identified MDS number | 47,381 | 90,265 | 250,449 | 124,321 |
| Mean length of MDS [bp] | 927 | 317 | 273 | 561 |
| Identified IES number | 9786 | 37,159 | 200,357 | 24,674 |
| Mean length of IES [bp] | 487 | 368 | 340 | 406 |
The identification of MDS and IES of Oxytricha is based on its MAC assembly using short-reads sequencing technology to make the results more comparable