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. 2024 Feb 15;15:1338929. doi: 10.3389/fphar.2024.1338929

TABLE 3.

CpGs methylation across the patients with Hepatocellular carcinoma based on SMART database.

CGIposition UCSC_RefGene_Group Probe Overall survival
Hazard ratio (95% CI) cutoff-high 50%, -low 50% p-value
Open_Sea Body cg1549455g 0.7 (0.5–0.99) 0.0423
Body cg03451779 0.89 (0.63–1.25) n.s
Body cg24878005 0.92 (0.64–1.27) n.s
Body cg11182199 0.91 (0.64–1.27) n.s
Body cg11878867 0.86 (0.61–1.21) n.s
Body cg24112628 1.47 (1.05–2.07) 0.0273
N_Shore Body cg11708358 0.71 (0.51–1) 0.0487
Body cg13569583 0.89 (0.63–1.25) n.s
Island Body cg24761195 1.07 (0.76–1.51) n.s
1stExon cg03401324 1.02 (0.72–1.43) n.s
1stExon cg07807409 1.8 (1.28–2.53) 0.0008
TSS200 cg05971912 1.2 (0.86–1.69) n.s
TSS200 cg25083496 1.47 (1.04–2.07) 0.0273
TSS200 cg07310318 0.81 (0.58–1.14) n.s
TSS200 cg20685554 1.06 (0.76–1.49) n.s
S_Shore TSS1500 cg20206129 0.93 (0.66–1.3) n.s
TSS1500 cg12232274 0.7 (0.5–0.99) 0.0415

Note: UCSC_RefGene_Group (gene region, based on UCSC, annotations).