δx
|
20 |
µm
|
Diameter of CA grid point |
pD
|
0.005 |
1/d |
Normal tissue death rate |
p▵
|
0.7 |
1/d |
Death probability in poor conditions |
pn
|
5e-4 |
1/d |
Necrotic turnover rate |
DO
|
1820 |
µm2/s
|
Diffusion rate of oxygen |
Dg
|
500 |
µm2/s
|
Diffusion rate of glucose |
DH
|
1080 |
µm2/s
|
Diffusion of protons |
OO
|
0.0556 |
mmol/L |
Oxygen concentration in blood |
GO
|
5 |
mmol/L |
Glucose concentration in blood |
pHO
|
7.4 |
pH |
pH of blood |
VO
|
0.012 |
mmol/L/s |
Maximal oxygen consumption |
kO
|
0.005 |
mmol/L |
Half-max oxygen concentration |
kG
|
0.04 |
mmol/L |
Half-max glucose concentration |
kH
|
2.5e-4 |
– |
Proton buffering coefficient |
Ad
|
0.35 |
– |
ATP threshold for death |
Aq
|
0.8 |
– |
ATP threshold for quiescence |
pH,min
|
6.1 |
pH |
Maximal acid resistance phenotype |
pH,norm
|
6.65 |
pH |
Normal acid resistance phenotype |
ΔH
|
0.003 |
pH |
Phenotype variation rate (acid res.) |
pG,max
|
50 |
– |
Maximal glycolytic phenotype |
ΔG
|
0.15 |
– |
Phenotype variation rate (glycolysis) |
τmin
|
0.95 |
Days |
Minimum cell cycle time |
σmin
|
80 |
µm
|
Minimum vessel spacing |
σmean
|
150 |
µm
|
Mean vessel spacing |
vmean
|
[5, 100] |
Days |
Vessel stability |
pang
|
[0, 1] |
– |
Angiogenesis rate |
TM
|
1 |
– |
Probability T-cell moves |
τT
|
4 |
– |
T-cell response delay |
αT
|
[1e-4,1e-1] |
– |
T-cell recruitment rate |
βT
|
10 |
Days |
Non-activated T-cell decay |
pP,min
|
5 |
– |
Maximal PD-L1 phenotype |
pP,norm
|
2.7 |
– |
Normal PD-L1 phenotype |
ΔP
|
[0,1] |
– |
Phenotype variation rate (PD-L1) |
de
|
0.042 |
Days |
T-cell engagement duration |
He
|
6.6 |
– |
half-max pH T-cell engagement time |
σe
|
4 |
– |
steepness of T-cell engagement time |
Hp
|
6.6 |
– |
half-max pH T-cell engagement probability |
σp
|
6 |
– |
steepness of T-cell engagement probability |
Li
|
65.35 |
percent |
T-cell survival rate in high glucose |
L0
|
21.78 |
percent |
T-cell survival rate in low glucose |
Lg
|
-16.67 |
percent |
T-cell glucose deprivation parameter |
DA
|
100 |
µm2/s
|
Anti-PD-L1 diffusion parameter |
γA
|
0.5 |
1/s
|
Anti-PD-L1 natural decay rate |
γP
|
0.001 |
1/s
|
Cellular bound PD-L1 decay rate |