Table 3. Classification results for freezing Clinical BERT vs. fine-tuning Clinical BERT on the small TCMR sample.
Acc refers to accuracy. Log.Reg. refers to logistic regression. DNN stands for dense neural network.
| Model | Overall Acc |
Positive precision |
Positive recall |
Positive F1-score |
|---|---|---|---|---|
| Frozen clinical BERT+Log.Reg. | 0.78 | 0.75 | 0.23 | 0.35 |
| Frozen clinical BERT+DNN | 0.88 | 0.77 | 0.77 | 0.77 |
| Fine-tuned clinical BERT+DNN | 0.92 | 0.87 | 0.83 | 0.85 |