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. 2024 Mar 4;15:1977. doi: 10.1038/s41467-024-46085-2

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — A Overlap of eliminated sequences previously published⁴² and eliminated sequences identified using CNVkit. B Distribution of lengths of eliminated sequences common to CNVkit and published data. Dotted line represents mean length. C Per-nucleotide read depth at eliminated sequences in whole-genome short-read⁴², Oxford Nanopore Technologies (ONT), and bisulfite sequencing data (WGBS, single replicate depicted). D mCG, as measured by WGBS and ONT, and BioCAP signal at eliminated sequences in sperm samples (single replicate depicted). E Browser track depicting mCG profiles from sperm (in biological replicate) at an eliminated sequence.