Table 1 |. Results for the 27 genome-wide significant index variants identified in the GWAS meta-analysis of 38,691 individuals with ADHD and 186,843 controls.
The location (chromosome (chr)) base position (bp) in hg19), alleles (A1 and A2), frequency (Freq.) of A1 in cases and controls, odds ratio (OR) of the effect with respect to A1, standard error (s.e.) and association P-values (two-sided) from inverse-variance weighted fixed effects model of the index variants are given. “Novel” indicates if the locus is a new ADHD risk locus i.e., not identified in ADHD2019 (ref. 14). Nearby genes located within 50 kb from index variants are listed (for a list of mapped genes based on other criteria see Supplementary Table 8).
Genomic locus | chr | bp | rs ID | A1 | A2 | Nearby genes | Freq. cases | Freq. controls | OR | s.e. | P-value | Novel |
---|---|---|---|---|---|---|---|---|---|---|---|---|
| ||||||||||||
1 | 1 | 44076469 | rs549845 | G | A | PTPRF, KDM4A | 0.321 | 0.326 | 1.082 | 0.01 | 9.03E-15 | no |
2 | 2 | 145714354 | rs1438898 | A | C | 0.762 | 0.769 | 1.065 | 0.01 | 4.88E-09 | yes | |
3 | 3 | 20724204 | rs2886697 | G | A | 0.634 | 0.643 | 1.061 | 0.01 | 7.90E-10 | no | |
4 | 3 | 43691501 | rs9877066 | G | A | SNRK, ANO10, ABHD5 | 0.944 | 0.951 | 0.888 | 0.02 | 6.60E-09 | yes |
5 | 3 | 49916710 | rs7613360 | C | T | TRAIP, CAMKV, MST1R, CTD-2330K9.3, MON1A | 0.598 | 0.614 | 0.948 | 0.01 | 3.18E-08 | yes |
6 | 3 | 51884072 | rs2311059 | G | A | IQCF3, IQCF2, IQCF5, IQCF1 | 0.314 | 0.308 | 0.944 | 0.01 | 3.16E-08 | yes |
7 | 3 | 71499401 | rs17718444 | C | T | FOXP1 | 0.695 | 0.660 | 1.063 | 0.01 | 2.87E-09 | yes |
8 | 3 | 87015142 | rs114142727 | C | G | VGLL3 | 0.988 | 0.988 | 1.285 | 0.04 | 5.13E-10 | yes |
9 | 4 | 112217523 | rs17576773 | C | T | 0.888 | 0.880 | 1.101 | 0.02 | 1.63E-10 | yes | |
10 | 4 | 147099654 | rs6537401 | G | A | LSM6, RP11-6L6.2, SLC10A7 | 0.660 | 0.655 | 0.945 | 0.01 | 1.40E-08 | yes |
11 | 5 | 87854395 | rs4916723 | A | C | 0.553 | 0.573 | 0.918 | 0.01 | 9.48E-15 | no | |
12 | 5 | 103964585 | rs77960 | G | A | 0.665 | 0.682 | 0.929 | 0.01 | 2.46E-13 | yes | |
13 | 5 | 144474779 | rs10875612 | C | T | 0.483 | 0.470 | 0.947 | 0.01 | 5.62E-09 | yes | |
14 | 6 | 70858701 | rs2025286 | A | C | COL19A1 | 0.553 | 0.550 | 0.947 | 0.01 | 4.00E-09 | yes |
15 | 7 | 67685754 | rs73145587 | A | T | 0.910 | 0.901 | 1.107 | 0.02 | 3.67E-08 | yes | |
16 | 7 | 114158954 | rs9969232 | G | A | FOXP2 | 0.344 | 0.382 | 0.934 | 0.01 | 9.98E-12 | no |
17 | 8 | 93277087 | rs7844069 | T | G | 0.428 | 0.399 | 1.057 | 0.01 | 6.74E-09 | yes | |
18 | 8 | 145802447 | rs4925811 | T | G | C8orf82, ARHGAP39 | 0.515 | 0.531 | 0.944 | 0.01 | 8.30E-09 | yes |
19 | 10 | 8784773 | rs11255890 | C | A | 0.389 | 0.401 | 1.054 | 0.01 | 4.14E-08 | yes | |
20 | 10 | 106453832 | rs11596214 | G | A | SORCS3 | 0.597 | 0.569 | 1.054 | 0.01 | 3.17E-08 | no |
21 | 11 | 28602173 | rs2582895 | C | A | METTL15 | 0.634 | 0.618 | 1.075 | 0.01 | 4.09E-14 | yes |
22 | 12 | 89771903 | rs704061 | T | C | DUSP6, POC1B | 0.554 | 0.560 | 0.946 | 0.01 | 2.30E-09 | no |
23 | 14 | 98690923 | rs76284431 | T | A | 0.847 | 0.842 | 0.922 | 0.01 | 1.19E-09 | yes | |
24 | 16 | 61966703 | rs1162202 | C | T | CDH8 | 0.630 | 0.606 | 1.063 | 0.01 | 1.92E-09 | yes |
25 | 18 | 5871800 | rs76857496 | C | A | TMEM200C | 0.870 | 0.859 | 1.083 | 0.01 | 1.24E-08 | yes |
26 | 18 | 50625779 | rs7506904 | G | A | DCC | 0.343 | 0.372 | 0.946 | 0.01 | 1.24E-08 | yes |
27 | 20 | 21250843 | rs6082363 | T | C | XRN2, NKX2-4 | 0.296 | 0.291 | 1.073 | 0.01 | 4.38E-12 | yes |