Skip to main content
. 2024 Mar 5;14:5450. doi: 10.1038/s41598-024-56158-3

Table 1.

A typical workflow for a ParseGBIF project.

Project step Relevant function
GBIF data preparation

download_gbif_data_from_doi

prepare_gbif_occurrence_data

select_gbif_fields

extract_gbif_issue

Check species names against WCVP database

wcvp_get_data

wcvp_check_name

wcvp_check_name_batch

standardize_scientificName

Collectors Dictionary

collectors_prepare_dictionary

collectors_get_name

generate_collection_event_key

Selecting the master digital voucher select_digital_voucher
Export dataset for further analysis

export_data

parseGBIF_summary