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. 2024 Mar 5;15:1992. doi: 10.1038/s41467-024-46221-y

Table 1.

List of iM forming sequences used in this study

iM / hybrid-ds/iM
iM Sequence (5‘- > 3‘) Tminvitro (pH 7) pHTinvitro (20 °C)
hTel d(C3TAA)3C3

n.d./

n.d.

6.20 ± 0.02/

6.09 ± 0.01

hT121-6 d(C6T)3C6

24.9 ± 0.5/

28.0 ± 0.4

6.94 ± 0.03/

6.81 ± 0.02

hBcl-2 d(CAGC4GCTC3GC5T2C2TC3GCGC3GC4T)

12.9 ± 0.5/

-

6.48 ± 0.03

-

hPDGFa d(C2GCGC4TC5GC5GC5GC13)

28.8 ± 1.2/

27.6 ± 0.9

6.96 ± 0.03/

6.96 ± 0.05

hRAD17 d(GCT2CTAGTCA2TC2AC9GC9G2A)

33.8 ± 0.5/

34.9 ± 0.6

7.08 ± 0.02/

7.10 ± 0.03

In the hybrid-ds/iM constructs, the ds segment d(GCTTCTAGTCAAT*).d(TTGACTAGAAGC) was attached to the 5′-end of iM. T* corresponds to the unpaired spacer nucleotide between ds and iM segments. For the complete list of sequences and modifications, see Supplementary Table 1. Tminvitro and pHTinvitro corresponds to melting temperature and transitional pH measured in-vitro (25 mM KPOi, 10.5 mM NaCl, 110 mM KCl, 1 mM MgCl2, 130 nM CaCl2) at pH = 7 and T = 20 °C, respectively. The Tminvitro and pHTinvitro values for iM and corresponding hybrid-ds/iM construct are typeset on top and bottom, respectively. Error bars for the pHTinvitro values represent the 95% confidence interval of the calculated fit. Errors reported for Tminvitro values correspond to the standard error of the mean for each triplicate experiment. The experimental data are displayed in Supplementary Figs. 1 and 2.