Table 4.
Five-way Venn comparisons of the management styles.
| Mgt Style | Manure | Lagoon | Trough | House fly | Stable fly | All Components | |||
|---|---|---|---|---|---|---|---|---|---|
| Microbiome | |||||||||
| Unique | CV | 165 (16.2) | 227 (22.2) | 111 (10.9) | 61 (6.0) | 36 (3.5) | 15 (1.5) | ||
| FT | 93 (8.9) | 207 (19.9) | 114 (11.0) | 190 (18.3) | 35 (3.4) | 21 (2.0) | |||
| Dairy | 126 (9.5) | 295 (22.2) | 139 (10.6) | 121 (9.1) | 45 (3.4) | 39 (3.0) | |||
| Total | CV | 423 (41.4) | 398 (39.0) | 255 (25.0) | 285 (27.9) | 269 (26.3) | 1021 | ||
| FT | 359 (34.5) | 457 (43.7) | 210 (20.2) | 408 (39.2) | 233 (22.4) | 1040 | |||
| Dairy | 514 (38.8) | 638 (48.1) | 327 (24.7) | 455 (34.3) | 379 (27.1) | 1326 | |||
| Pathogenic Species | |||||||||
| Unique | CV | 7 (10.8) | 1 (1.5) | 3 (4.8) | 9 (13.8) | 1 (1.5) | 1 (1.6) | ||
| FT | 2 (2.9) | 3 (4.4) | 2 (2.9) | 23 (33.8) | 4 (5.9) | 3 (4.7) | |||
| Dairy | 5 (6.3) | 2 (2.5) | 4 (5.1) | 9 (11.4) | 5 (6.3) | 5 (6.8) | |||
| Total | CV | 27 (45.8) | 12 (20.3) | 16 (27.1) | 37 (62.7) | 34 (57.6) | 59 | ||
| FT | 17 (26.6) | 20 (31.3) | 6 (9.4) | 51 (79.7) | 25 (39.1) | 64 | |||
| Dairy | 32 (40.5) | 23 (35.4) | 18 (22.8) | 54 (68.4) | 43 (54.4) | 79 | |||
Comparisons of the number (percentage of total number of species in that management style) of unique and total species in the total microbiome (n = 1,326) and the pathogenic species (n = 79) using a five-way comparison associated with each component. The samples were collected from the areas in which the management (Mgt) style of cross-vent (CV) or flow-through (FT) was implemented, and the unique species were combined into cross-vent and flow-through (dairy) data. Also listed is the total number of species found in each component.