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. 2024 Feb 29;36(1):90–102. doi: 10.21147/j.issn.1000-9604.2024.01.09

Table 2. Comparisons of significant gene alteration frequency in GEPNEC and LNEC patients.

Gene % (n/N) OR (95% CI) P FDR
GEPNEC LNEC
GEPNEC, gastroenteropancreatic neuroendocrine carcinoma; LNEC, lung NEC; OR, odds ratio; 95% CI, 95% confidence interval; FDR, false discovery rate; Inf and −Inf, infinitive and −infinitive.
TP53 (mutation) 82.8 (82/99) 56.1 (32/57) 0.27 (0.12−0.59) 0.001 0.005
NKX2-1 (amplification) 0 (0/99) 10.5 (6/57) Inf (2.17−Inf) 0.002 0.005
PIK3CA (amplification) 0 (0/99) 10.5 (6/57) Inf (2.17−Inf) 0.002 0.005
KRAS (mutation) 21.2 (21/99) 3.5 (2/57) 0.14 (0.01−0.60) 0.002 0.005
TERT (amplification) 13.1 (13/99) 0 (0/57) 0 (0−0.52) 0.002 0.006
IL7R (amplification) 10.1 (10/99) 0 (0/57) 0 (0−0.73) 0.014 0.023
CTNNB1 (mutation) 16.2 (16/99) 3.5 (2/57) 0.19 (0.02−0.86) 0.019 0.027
GRIN2A (mutation) 1.0 (1/99) 8.8 (5/57) 9.29 (1.00−449.03) 0.025 0.028
PTPRD (mutation) 1.0 (1/99) 8.8 (5/57) 9.29 (1.00−449.03) 0.025 0.028
RB1 (mutation) 38.4 (38/99) 49.1 (28/57) 1.48 (0.95−8.46) 0.042 0.050