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. 2024 Feb 21;12(9):3575–3584. doi: 10.1021/acssuschemeng.3c06513

Figure 5.

Figure 5

Analysis of the structural properties of PADs with N55 as an example employing MD simulation-derived data and the pipeline-generated PyMOL-executable scripts. (a) N55 depicted as a cartoon and colored by RMSF. (b) Residues in hydrophobic clusters. (c) Residues involved in salt bridges. (d) Residues involved in hydrogen bonds. All structures are visualized using PyMOL.