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. 2024 Mar 5;22:241. doi: 10.1186/s12967-024-04973-7

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© The Author(s) 2024

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — DeepTCR analysis reveals relatedness of T-cell repertoires in two inflammation samples. Summarized counts of productive TCR clones that translate into the same amino acid sequences were used for DeepTCR analysis. Unsupervised clustering of 256 normalized structural concepts is shown. Samples with less than 500 reads should be interpreted with caution. Blue text, tumor samples; red text, inflamed normal tissues