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. 2024 Mar 5;25:247. doi: 10.1186/s12864-024-10149-w

Table 1.

Plastid genome size and gene count in the tribe Ampelopsideae

Species name Genome size and GC content
total LSC SSC IR Number of genes
Length (bp) G + C (100%) Length (bp) G + C (100%) Length (bp) G + C(100%) Length (bp) G + C(100%) Gene CDS tRNA rRNA
Ampelopsis japonica 2 161,430 37.32 89,627 35.21 18,977 31.85 26,413 42.88 133 88 37 8
Ampelopsis grandulosa 3 162,328 37.38 90,270 35.21 18,902 31.81 26,578 42.81 133 88 37 8
Ampelopsis sinica 162,468 37.27 90,419 35.16 18,895 31.79 26,577 42.81 133 88 37 8
Ampelopsis grandulosa 1 162,460 37.32 90,411 34.58 18,895 31.96 26,577 42.01 133 88 37 8
Ampelopsis grandulosa 2 162,348 37.32 90,292 35.21 18,902 31.79 26,577 42.84 133 88 37 8
Ampelopsis japonica 1 162,370 37.35 90,312 35.21 18,902 31.79 26,578 42.81 133 88 37 8
Ampelopsis humulifolia 161,724 37.33 89,647 35.23 19,032 31.83 26,521 42.84 133 88 37 8
Ampelopsis heterophylla 1 162,347 37.32 90,284 35.22 18,897 31.76 26,583 42.84 133 88 37 8
Ampelopsis heterophylla 2 162,430 37.30 90,344 35.18 18,920 31.76 26,583 42.79 133 88 37 8
Ampelopsis bodinieri 162,368 37.33 90,304 35.21 18,898 31.81 26,583 42.79 133 88 37 8
Ampelopsis cordata 162,297 37.36 90,124 35.22 19,069 31.88 26,552 42.83 133 88 37 8
Rhoicissus tomentosa 160,884 37.39 88,850 35.07 18,988 31.52 26,523 42.85 133 88 37 8
Rhoicissus tnidenc 160,692 37.31 88,659 35.24 18,987 31.54 26,523 42.82 133 88 37 8
Rhoicissus digitata 160,760 37.39 88,716 35.18 19,070 31.54 26,487 42.87 133 88 37 8
Clematicissus simsiana 162,432 37.44 90,374 34.74 19,082 31.67 26,488 42.91 133 88 37 8
Clematicissus granulosa 161,687 37.46 89,567 35.07 19,239 31.72 26,470 42.87 133 88 37 8
Clematicissus striata ssp argentina 160,653 37.49 88,612 35.48 19,015 31.83 26,513 42.85 133 88 37 8
Clematicissus striata 160,389 37.45 88,324 35.42 19,055 31.83 26,505 42.86 134 89 37 8
Clematicissus opaca 161,352 37.31 89,085 35.15 19,091 31.67 26,588 42.81 134 89 37 8
Nekemias megalophylla 162,201 37.32 88,868 35.27 18,947 31.82 27,193 42.45 134 89 37 8
Nekemias hypoglauca 163,310 37.35 89,625 35.36 19,063 31.69 27,311 42.45 134 89 37 8
Nekemias cantoniensis 1 162,860 37.32 89,235 35.37 19,083 31.69 27,271 42.49 134 89 37 8
Nekemias cantoniensis 2 163,056 37.37 89,165 35.37 19,067 31.71 27,412 42.39 134 89 37 8
Nekemias rubifolia 162,983 37.35 89,358 35.31 19,077 31.67 27,274 42.49 134 89 37 8
Nekemias grossedentata 1 162,165 37.41 89,262 35.35 18,439 31.82 27,232 42.51 134 89 37 8
Nekemias celebica 162,811 37.36 89,155 35.44 19,066 31.70 27,295 42.47 134 89 37 8
Nekemias grossedentata 2 162,566 37.38 89,331 35.32 19,051 31.71 27,092 42.63 134 89 37 8
Nekemias grossedentata 3 162,590 37.38 89,377 35.30 19,071 31.69 27,071 42.65 134 89 37 8
Nekemias cantoniensis 3 162,739 37.36 88,966 35.27 19,055 31.72 27,359 42.41 133 89 36 8
Nekemias arborea 164,115 37.31 90,959 34.93 21,778 32.22 25,689 42.95 134 89 37 8
Parthenocissus semicordata 161,828 37.41 89,881 35.36 19,153 31.65 26,397 42.91 133 88 37 8
Parthenocissus quinquefolia 161,200 37.48 89,298 35.51 18,960 31.83 26,471 42.86 133 88 37 8
Cissus antarctica 162,215 37.53 90,063 35.34 19,092 31.78 26,530 42.95 133 88 37 8
Cissus acrantha 163,707 37.65 93,530 35.76 19,082 31.91 26,527 43.11 133 88 37 8
Cayratia lineats 160,155 37.72 88,427 35.84 19,050 32.17 26,339 42.88 133 88 37 8
Pseudocayratia dichromocarpa 157,486 37.55 85,420 35.58 18,850 31.52 26,608 42.85 133 88 37 8