Skip to main content
. 2024 Feb 4;15:100367. doi: 10.1016/j.jpi.2024.100367

Table 1.

Summary of publicly available datasets containing LN tissue sections.

Dataset Summary Ground truth Sample size Dimensionality Suitable applications
Camelyon16 H&E stained slides of breast cancer sentinel lymph nodes from 2 centers Patient-level labels: pN stage. Pixel-level: partial tumor annotations 399 WSIs WSIs scanned at 20x and 40x magnifications Segmentation, slide-level classification, MIL
Camelyon17 H&E stained slides of breast cancer sentinel lymph nodes from 5 centers Patient-level pN stage label Pixel-level: partial tumor annotations 1000 WSIs WSIs scanned at 20x and 40x Segmentation, classification, MIL
Patch Camelyon Patches extracted from Camelyon16 dataset Patch-level label: tumor positive or negative 327,680 patches 96x 95 pixel patches at 10x Patch classification
SLN-Breast, TCIA H&E stained slides scanned in one center Patient-level labels: pN stage label 130 slides from 78 patients WSIs scanned at 20x Slide-level classification, MIL
Axillary lymph nodes in breast cancer, AIDA H&E slides of breast cancer sentinel lymph nodes (2 consecutive slices) from multiple scanners Patient-level labels: treatment, pN stage, primary tumor. IHC slides for cytokeratin AE1/AE3 396 patients WSIs scanned at 20x Tumor segmentation, slide-level classification, MIL
Breast cancer lymph nodes for HEV detection Immunofluorescently stained HEVs using HEV markers for peripheral node addressin PNAd and vascular marker Claudin-5 Immunofluorescence signal for HEVs 73 patients with invasive, non-invasive breast carcinoma, or cancer-free Not specified HEV segmentation and diameter evaluation in LNs
Multi-magnification organ network (MMO-Net) dataset H&E stained slides of rat mandibular lymph nodes from 3 centers Manual LN contour annotations 53 WSIs containing lymph nodes, 267 WSIs from other organs Not specified LN contour segmentation