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. 2024 Feb 6;13:e90116. doi: 10.7554/eLife.90116

Table 1. Kinetic parameters of murine Cpeb3 ribozyme constructs.

Construct* A k1 B k2 C
–10/72 0.72 ± 0.09 0.39 ± 0.09 0.082 ± 0.026
–49/72/165 0.88 ± 0.02 0.42 ± 0.04 0.013 ± 0.015 0.11 ± 0.03 0.04 ± 0.02
–233/72/165 0.78 ± 0.04 0.31 ± 0.04 0.035 ± 0.006 0.17 ± 0.02 0.029 ± 0.005
*

Construct size is defined as (length of sequence upstream of the ribozyme cleavage site)/[Cpeb3 ribozyme (72 nts)]/(downstream sequence).

Co-transcriptional self-scission was modeled by a bi-exponential decay model with a residual. A and B represent fractions of the population cleaving with fast (k1) and slow (k2) rate constants, cleave. Errors represent SEM of at least three experiments. For the smallest ribozyme construct (-10/72), a monoexponential decay function was sufficient to model the data.