Table 1. Kinetic parameters of murine Cpeb3 ribozyme constructs†.
| Construct* | A | k1 | B | k2 | C |
|---|---|---|---|---|---|
| –10/72 | 0.72 ± 0.09 | 0.39 ± 0.09 | 0.082 ± 0.026 | ||
| –49/72/165 | 0.88 ± 0.02 | 0.42 ± 0.04 | 0.013 ± 0.015 | 0.11 ± 0.03 | 0.04 ± 0.02 |
| –233/72/165 | 0.78 ± 0.04 | 0.31 ± 0.04 | 0.035 ± 0.006 | 0.17 ± 0.02 | 0.029 ± 0.005 |
Construct size is defined as (length of sequence upstream of the ribozyme cleavage site)/[Cpeb3 ribozyme (72 nts)]/(downstream sequence).
Co-transcriptional self-scission was modeled by a bi-exponential decay model with a residual. A and B represent fractions of the population cleaving with fast (k1) and slow (k2) rate constants, cleave. Errors represent SEM of at least three experiments. For the smallest ribozyme construct (-10/72), a monoexponential decay function was sufficient to model the data.