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. 2024 Feb 6;13:e90116. doi: 10.7554/eLife.90116

Table 2. List of primers used to make ribozyme constructs and measure RNA expression levels.

Target Sequence
Cpeb3 exons 1-2 Forward CTCCCGTTTCCTTCCTCCAG
Reverse GGGCTGGGTTTTGCTTTTGT
Cpeb3 exons 2–3 Forward CGATAATGGTAACAATCTGTTGCC
Reverse CCTTATCATATCCATTAAGGAGTTCTCC
Cpeb3 exons 3–6 Forward GACCGGAGTAGGCCCTATGA
Reverse CCAGACGATAAGGCCTGATCA
Cpeb3 exons 6–9 Forward ACTCTAGAAAGGTGTTTGTTGGAGG
Reverse TCGAAGGGGTCGTGGAACT
Cpeb3 ribozyme cleaved
(220 bp amplicon; 18 nts from the cleavage site)
Forward GTTCACGTCGCGGCC
Reverse GTGATATAGTGTGTTCTTCAGTGACTCCT
Cpeb3 ribozyme uncleaved
(283 bp amplicon starting 45 nts upstream and ending 238 nts downstream of the ribozyme cleavage site)
Forward CCAAGCAGCAGCACAGGTC
Reverse GTGATATAGTGTGTTCTTCAGTGACTCCT
Cpeb3 fourth intron Forward CACTCTAGCCTAACTGGTGAGCTC
Reverse AGTCATTCCAACAGAAATGAAGTACC
Gria1 (GluA1) Forward GTCCGCCCTGAGAAATCCAG
Reverse CTCGCCCTTGTCGTACCAC
Gria2 (GluA2) Forward TGGTACGACAAAGGAGAGTGC
Reverse ACCAGCATTGCCAAACCAAG
Dlg4 (PSD-95) Forward TGAGATCAGTCATAGCAGCTACT
Reverse CTTCCTCCCCTAGCAGGTCC
Grin2b (NR2B) Forward GCCATGAACGAGACTGACCC
Reverse GCTTCCTGGTCCGTGTCATC
Cpeb1 Forward GACTCAGACACGAGTGGCTTCA
Reverse ACGCCCATCTTTAGAGGGTCTC
Cpeb2 Forward GAGATCACTGCCAGCTTCCGAA
Reverse CAATGAGTGCCTGGACTGAGCT
Cpeb4 Forward TCAGCTCCAGAAGTATGCTCGC
Reverse GAGTGCATGTCAAACGTCCTGG
Gapdh Forward TGACCACAGTCCATGCCATC
Reverse GACGGACACATTGGGGGTAG