Table 2.
Antibiotic resistance genes identified in Weissella cibaria strains using CARD (Comprehensive Antibiotic Resistance Database) webserver
| Strain | RGI criteria | ARO term | Detection criteria |
AMR gene family |
Drug class |
Resistance mechanism |
% identity of matching region | % length of reference sequence |
|---|---|---|---|---|---|---|---|---|
|
W21 W25 W42 |
Strict | vanY gene in vanB cluster | Protein homolog model | vanY, glycopeptide resistance gene cluster | Glycopeptide antibiotic | Antibiotic Target alteration | 34.95 | 97.39 |
| Strict | vanT gene in the vanG cluster | protein homolog model | Glycopeptide resistance gene cluster, VanT | Glycopeptide antibiotic | Antibiotic target alteration | 33.33 | 69.38 |