Table 2.
Average EF1% of the divided set based on average 2D dissimilarity of active compounds from the co-crystalized molecule. The numbers in the parentheses are the number of proteins. The best value in each set is highlighted as bold.
| Average Dissimilarity | PL-PS3 (BWS) | PL-PS3 (LCS) | AutoDock Vina | DOCK6 |
|---|---|---|---|---|
| > 0.80 (5) | 18.78 | 17.20 | 4.00 | 8.80 |
| > 0.70 (10) | 14.45 | 14.22 | 6.81 | 12.77 |
| > 0.60 (3) | 15.00 | 13.41 | 5.40 | 9.52 |
| < 0.60 (7) | 10.78 | 11.35 | 13.37 | 12.34 |