Table 4.
The types of SSRs in Wolffia arrhiza and their corresponding regions and locations.
| Repeat type | Repeat unit | Number of repeats | Repeat length | Number of SSRs | Region | Location |
|---|---|---|---|---|---|---|
| Mono-nucleotide | A | 10 | 10 | 18 | LSC(15) | IGS(12) |
| Intron(3, petB, rps16, trnK-UUU) | ||||||
| SSC(3) | IGS(3) | |||||
| 11 | 11 | 5 | LSC(2) | IGS(2) | ||
| SSC(1) | IGS(1) | |||||
| IRb(2) | IGS(1) | |||||
| PCG(1, ycf1) | ||||||
| 13 | 13 | 3 | LSC(2) | IGS(2) | ||
| IRb(1) | IGS(1) | |||||
| T | 10 | 10 | 9 | LSC(7) | IGS(5) | |
| Intron(1, pafI) | ||||||
| PCG(1, rpoB) | ||||||
| SSC(2) | IGS(2) | |||||
| 11 | 11 | 5 | LSC(3) | IGS(2) | ||
| Intron(1, clpP1) | ||||||
| IRa(2) | IGS(1) | |||||
| PCG(1, ycf1) | ||||||
| 12 | 12 | 1 | LSC(1) | IGS(1) | ||
| 13 | 13 | 1 | IRa(1) | IGS(1) | ||
| Di-nucleotide | AT | 6 | 12 | 3 | LSC(3) | IGS(3) |
| 7 | 14 | 1 | LSC(1) | IGS(1) | ||
| TA | 6 | 12 | 1 | SSC(1) | IGS(1) | |
| 8 | 16 | 1 | LSC(1) | IGS(1) | ||
| Total | 48 |
LSC(35, 72.92%) SSC(7, 14.58%) IR(6, 12.5%) |
IGS(40, 83.3%) Intron(5, 10.42%) PCG(3, 6.25%) |