Table 5.
The types of long repeat in Wolffia arrhiza and their corresponding regions and locations.
| Repeats match type | Repeats length range | Repeats length | Number of repeats set | Region of repeats set | Location of repeats set |
|---|---|---|---|---|---|
| F | 30–39 | 30 | 4 | LSC(3) | IGS(2) |
| PCG(1, trnS(GCU)-trnS(UGA)) | |||||
| LSC-IRb(1) | Intron-IGS(1, pafI) | ||||
| 31 | 3 | LSC(1) | IGS(1) | ||
| IRa(1) | PCG(1, ycf2) | ||||
| IRb(1) | PCG(1, ycf2) | ||||
| 32 | 1 | LSC(1) | IGS(1) | ||
| 34 | 1 | LSC(1) | IGS(1) | ||
| 36 | 1 | LSC-IRa(1) | Intron-IGS(1, petB) | ||
| 37 | 2 | IRa(1) | PCG(1, ycf2) | ||
| IRb(1) | PCG(1, ycf2) | ||||
| 39 | 1 | LSC-IRb(1) | Intron-IGS(1, pafI) | ||
| 40–49 | 41 | 2 | IRa(1) | PCG(1, ycf2) | |
| IRb(1) | PCG(1, ycf2) | ||||
| 60–69 | 63 | 1 | LSC(1) | IGS(1) | |
| P | 30–39 | 30 | 2 | LSC(1) | IGS(1) |
| LSC-IRa(1) | Intron-IGS(1, pafI) | ||||
| 31 | 4 | LSC(2) | IGS(1) | ||
| IGS-PCG(1, pbf1) | |||||
| IRa-IRb(2) | PCG(2, ycf2) | ||||
| 32 | 2 | LSC(2) |
PCG(2, trnS(GCU)-trnS(GGA) / trnS(UGA)-trnS(GGA)) |
||
| 36 | 1 | LSC-IRb(1) | Intron-IGS(1, petB) | ||
| 37 | 2 | IRa-IRb(2) | PCG(2, ycf2) | ||
| 39 | 1 | LSC-IRa(1) | Intron- IGS(1, pafI) | ||
| 40–49 | 41 | 2 | IRa-IRb(2) | PCG(2, ycf2) | |
| 70~ | 31,872 | 1 | IRa-IRb(1) |
Intron-PCG(1, rps7-ycf2-ndhB-ycf1-trnA(UGC)-rpl2-rpl23-trnI(CAU)-rrn5-rrn23-rrn16-trnN(GUU)-trnV(GAC)-trnR(ACG)-rps12-rrn4.5-rps15-trnI(GAU)-trnL(CAA)- trnM(CAU) |
|
| R | 30–39 | 32 | 1 | LSC(1) | IGS(1) |
In the case of differing regions or locations between the repeats, they are connected using '-' and indicated as a repeat set. The genes follow the same pattern. F for forward repeat, R for reverse repeat, and P for palindromic repeat.