Table 3.
Comparisons of the allelic and genotype distributions of the eight studied SNPs between the schizophrenia subgroups and the healthy control group.
SNP | Major/minor allele (MAF)# | Group | Genotype n (%) | Allele n (%) | OR | 95% CI | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
MM | Mm | mm | p value | M | m | p value | ||||||
TH | ||||||||||||
rs10770141 | G > A [A:0.068] | HC | 359 [85.7] | 57 [13.6] | 3 [0.7] | 0.696 | 775 [92.5] | 63 [7.5] | 0.837 | |||
Non-TRS | 457 [86.2] | 72 [13.6] | 1 [0.2] | 986 [93.0] | 74 [7.0] | 0.923 | 0.651–1.309 | |||||
TRS | 371 [87.1] | 52 [12.2] | 3 [0.7] | 794 [93.2] | 58 [6.8] | 0.910 | 0.621–1.301 | |||||
rs6356 | A > G [G:0.325] | HC | 201 [49.4] | 170 [41.8] | 36 [8.8] | 0.317 | 572 [70.3] | 242 [29.7] | 0.396 | |||
Non-TRS | 238 [45.8] | 235 [45.2] | 47 [9.0] | 711 [68.4] | 329 [31.6] | 1.094 | 0.896–1.335 | |||||
TRS | 215 [52.1] | 158 [38.3] | 40 [9.7] | 588 [71.2] | 238 [28.8] | 0.957 | 0.773–1.184 | |||||
DRD2 | ||||||||||||
rs1800497 | G > A [A:0.373] | HC | 205 [45.7] | 184 [41.0] | 60 [13.4] | 0.311 | 594 [66.1] | 304 [33.9] | 0.256 | |||
Non-TRS | 214 [40.2] | 239 [44.8] | 80 [15.0] | 667 [62.6] | 399 [37.4] | 1.169 | 0.971–1.407 | |||||
TRS | 176 [41.1] | 196 [46.5] | 53 [12.4] | 551 [64.4] | 305 [35.6] | 1.082 | 0.889–1.317 | |||||
rs6275 | A > G [G:0.432] | HC | 176 [37.1] | 215 [45.3] | 84 [17.7] | 0.287 | 567 [59.7] | 383 [40.3] | 0.183 | |||
Non-TRS | 167 [31.5] | 261 [49.2] | 103 [19.4] | 595 [56.0] | 467 [44.0] | 1.162 | 0.973–1.388 | |||||
TRS | 148 [34.7] | 211 [49.4] | 68 [15.9] | 507 [59.4] | 347 [40.6] | 1.013 | 0.893–1.223 | |||||
COMT | ||||||||||||
rs4680 | G > A [A:0.317] | HC | 205 [42.8] | 210 [43.8] | 64 [13.4] | 0.288 | 620 [64.7] | 338 [35.3] | 0.310 | |||
Non-TRS | 243 [44.9] | 231 [43.2] | 61 [11.4] | 717 [67.0] | 353 [33.0] | 0.903 | 0.751–1.085 | |||||
TRS | 192 [44.9] | 198 [46.3] | 38 [8.9] | 582 [68.0] | 274 [32.0] | 0.864 | 0.710–1.050 | |||||
SLC6A3 | ||||||||||||
rs3756450 | A > G [G:0.469] | HC | 133 [30.8] | 210 [48.6] | 89 [20.6] | 0.006 | 476 [55.1] | 388 [44.9] | <0.001 | |||
Non-TRS | 112 [22.6] | 250 [50.4] | 134 [27.0] | 474 [47.8] | 518 [52.2] | 1.341 | 1.117–1.620 | |||||
TRS | 124 [30.8] | 200 [49.8] | 78 [19.4] | 448 [55.7] | 356 [44.3] | 0.975 | 0.804–1.183 | |||||
rs420422 | G > A [A:0.392] | HC | 152 [35.8] | 202 [47.6] | 70 [16.5] | 0.330 | 506 [59.7] | 342 [40.3] | 0.119 | |||
Non-TRS | 214 [41.6] | 233 [45.3] | 67 [13.0] | 661 [64.3] | 367 [35.7] | 0.822 | 0.681–0.991 | |||||
TRS | 157 [37.8] | 200 [48.2] | 58 [14.0] | 514 [61.9] | 316 [38.1] | 0.910 | 0.748–1.107 | |||||
10 10 | 10 X | X Y | 10 repeat | 9 repeat | Others | |||||||
40-bp VNTR | 10 > others [10: 0.93]# | HC | 93 [91.2] | 9 [8.8] | 0 [0] | 0.004 | 195 [95.6] | 5 [2.5] | 4 [2.0] | 0.023 | ||
Non-TRS | 79 [80.6] | 19 [19.4] | 0 [0] | 177 [89.8] | 8 [4.1] | 12 [6.1] | 2.448 | 1.086–5.518 | ||||
TRS | 77 [77.8] | 17 [17.2] | 5 [5.1] | 171 [86.8] | 15 [7.6] | 11 [5.6] | 3.294 | 1.502–7.225 |
SNP, Single nucleotide polymorphism; VNTR, Variable number of tandem repeats.#From Sano et al. (60).