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. 2024 Mar 4;25(5):2969. doi: 10.3390/ijms25052969

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© 2024 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Associated region and haplotype analysis of OsCKX9. (A) Regional Manhattan plots and linkage distribution (LD) heatmap of OsCKX9. (B) Gene structure and haplotype analysis of OsCKX9. LD blocks indicated ± 200 kb. LN: Low nitrogen; ETN: Effective tillering number. The box plot describes the ETN distribution of a subgroup with a haplotype. Significant differences in two-way ANOVA (** p < 0.01, ** indicates significant difference in average ETN among 469 accessions at p < 0.01, ns: no significant. H: Haplotypes, Y: Years, H × Y: Haplotypes × Years).