Table 2.
Genomic features of lactic acid bacteria. CDS:Coding Sequences, N50: the shortest sequence length at 50% of the genome, L50: the smallest number of contigs whose length sum gives N50
| L. buchneri Egmn17 | L. brevis Atlas17 | L. plantarum Gmze16 | L. namurensis Ozge01 | |
|---|---|---|---|---|
| Genome size (bp) | 2,655,387 | 2,575,327 | 2,798,818 | 2,792,218 |
| Predicted CDS | 2451 | 2687 | 3162 | 2632 |
| Number of genes | 2519 | 2467 | 2890 | 2600 |
| G + C content (%) | 40.5 | 46.4 | 45.0 | 51.2 |
| Contig N50 (bp) | 75,706 | 62,075 | 70,400 | 125,563 |
| Contig L50 | 12 | 14 | 12 | 7 |
| No. of contigs | 99 | 151 | 121 | 92 |
| tRNA | 60 | 56 | 58 | 62 |
| rRNA | 8 | 4 | 7 | 6 |
| tmRNA | - | 1 | 1 | 1 |