Skip to main content
. 2024 Mar 12;19:11. doi: 10.1186/s13015-023-00245-z

Table 7.

Running times (seconds) for different subset sizes of copies of Chromosome 19 (parallel implementations)

Size (MB) Sacamats-par Libsais-par Big-bwt-par DS1-par DS2-par DS3-par
250 10.01 4.80 34.70 19.59 20.54 21.41
500 15.03 9.33 45.14 29.67 31.15 32.78
750 19.72 13.83 53.42 39.20 41.26 43.68
1000 26.32 18.29 63.04 50.38 52.68 56.01
2000 47.85 37.62 88.54 107.34 111.20 115.86
4000 97.22 96.37 142.29 256.72
6000 156.50 156.80 195.62