TABLE 1.
Accession ID | Gene | Annotation | COG category | Log2 fold change (input/output) |
---|---|---|---|---|
Fjoh_0334 | FJOH_RS01770 | DegT/DnrJ/EryC1/StrS family aminotransferase | E | 2.54 |
Fjoh_0651 | FJOH_RS03415 | Hypothetical protein | No COG | 2.14 |
Fjoh_0707 | FJOH_RS03710 porZ | T9SS type A sorting domain-containing protein PorZ | T | 1.48 |
Fjoh_1448 | xrtF | Exosortase family protein XrtF | S | 3.82 |
Fjoh_1449 | FJOH_RS07530 | Exosortase F system-associated protein | No COG | 3.74 |
Fjoh_1555 | porV | T9SS outer membrane channel protein PorV | I | 2.69 |
Fjoh_1556 | porU | T9SS sortase PorU | S | 1.33 |
Fjoh_1653 | sprA | Cell surface protein SprA | S | 3.25 |
Fjoh_2379 | FJOH_RS12370 | LysM peptidoglycan-binding domain-containing protein | M | 2.5 |
List of genes that were validated by constructing in-frame deletions. The complete list of genes identified is provided in Table S1. The COG categories are abbreviated as follows: E, amino acid metabolism and transport; T, signal transduction; S, unknown function; I, lipid transport and metabolism; and M, cell wall/membrane/envelope biogenesis.