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. 2024 Feb 8;15(3):e03428-23. doi: 10.1128/mbio.03428-23

TABLE 1.

Sand colonization genes identified using INSeq screen and validated by mutant analysisa

Accession ID Gene Annotation COG category Log2 fold change (input/output)
Fjoh_0334 FJOH_RS01770 DegT/DnrJ/EryC1/StrS family aminotransferase E 2.54
Fjoh_0651 FJOH_RS03415 Hypothetical protein No COG 2.14
Fjoh_0707 FJOH_RS03710 porZ T9SS type A sorting domain-containing protein PorZ T 1.48
Fjoh_1448 xrtF Exosortase family protein XrtF S 3.82
Fjoh_1449 FJOH_RS07530 Exosortase F system-associated protein No COG 3.74
Fjoh_1555 porV T9SS outer membrane channel protein PorV I 2.69
Fjoh_1556 porU T9SS sortase PorU S 1.33
Fjoh_1653 sprA Cell surface protein SprA S 3.25
Fjoh_2379 FJOH_RS12370 LysM peptidoglycan-binding domain-containing protein M 2.5
a

List of genes that were validated by constructing in-frame deletions. The complete list of genes identified is provided in Table S1. The COG categories are abbreviated as follows: E, amino acid metabolism and transport; T, signal transduction; S, unknown function; I, lipid transport and metabolism; and M, cell wall/membrane/envelope biogenesis.