Table 2.
Significative clusters identified with HAllA for taxonomy and metabolomics data. Shifts in species abundances are indicated inside parenthesis.
| Cluster rank | Cluster X | Cluster Y | Best adjusted p-value |
|---|---|---|---|
| 1 |
Dorea sp. 5–2 (down at D7) Lactobacillus johnsonii (down at D7) Lactobacillus animalis (down at D7) Lactobacillus taiwanensis (down at D7) Lactobacillus reuteri reuteri (down at D7) |
C4; TMAO |
0.001918 |
| 2 | Lactobacillus reuteri reuteri (down at D7) | Butyrate (cecum); Acetate (cecum); Propionate(cecum) |
0.008292 |
| 3 | Bacteroidales bacterium M1 (down at D7) | His | 0.009811 |
| 4 | Dorea sp. 5–2 (down at D7) | C3 | 0.009811 |
| 5 | Bacteroidales bacterium M7 (up at D7) | 3-IPA | 0.026983 |
| 6 | Lactobacillus taiwanensis (down at D7) | Propionate(cecum) | 0.028723 |
| 7 | Ruminococcaceae bacterium D16 (down at D7) | His | 0.03179 |
| 8 | Bacteroidales bacterium M6 (down at D7) | Spermidine | 0.03179 |
| 9 | Bifidobacterium animalis (down at D7) | Acetate (cecum) | 0.037395 |