Table 2:
Summary statistics of the interfaces of the benchmark dataset of homodimers. The full dataset and major properties and annotations associated with each entry can be found in the Supplementary Table S1. The calculation performed with freesasa-2.0.3 (Mitternacht 2016).
Min. | 1st Qu. | Median | Mean | 3rd Qu. | Max. | set | property |
---|---|---|---|---|---|---|---|
1 | 49 | 65 | 72.2 | 83 | 663 | all | number of contacts* |
100.62 | 1612.79 | 2097.57 | 2273.57 | 2646.31 | 10984.55 | all | BSA |
38.08 | 540.63 | 791.64 | 873.09 | 1100.79 | 4540.25 | all | BSA polar |
22.2 | 994.15 | 1260.71 | 1396.86 | 1632.15 | 7170.96 | all | BSA apolar |
0.09 | 0.31 | 0.38 | 0.38 | 0.45 | 0.86 | all | fraction BSA polar |
0.14 | 0.55 | 0.62 | 0.62 | 0.69 | 0.91 | all | fraction BSA apolar |
13 | 45 | 57 | 62.71 | 72 | 262 | physio | number of contacts* |
589.93 | 1421.01 | 1778.8 | 1918.41 | 2150.92 | 7202.51 | physio | BSA |
114.73 | 435.52 | 582.5 | 653.9 | 780.13 | 2721.74 | physio | BSA polar |
101.16 | 944.95 | 1167.95 | 1264.51 | 1458.69 | 4480.77 | physio | BSA apolar |
0.09 | 0.28 | 0.34 | 0.34 | 0.39 | 0.86 | physio | fraction BSA polar |
0.14 | 0.61 | 0.66 | 0.66 | 0.72 | 0.91 | physio | fraction BSA apolar |
1 | 57 | 72 | 81.63 | 92 | 663 | non-physio | number of contacts* |
100.62 | 2074.61 | 2426.91 | 2626.61 | 2959.75 | 10984.55 | non-physio | BSA |
38.08 | 796.62 | 1033.73 | 1090.98 | 1284.65 | 4540.25 | non-physio | BSA polar |
22.2 | 1091.63 | 1366.69 | 1528.42 | 1768.84 | 7170.96 | non-physio | BSA apolar |
0.09 | 0.36 | 0.43 | 0.42 | 0.49 | 0.78 | non-physio | fraction BSA polar |
0.22 | 0.51 | 0.57 | 0.57 | 0.63 | 0.91 | non-physio | fraction BSA apolar |
Residue-Residue contacts, using a distance threshold of 5 Å.