Interaction types and amino acids involved in the agonism (iperoxo, 77-LH-28-1) or antagonism (atropine, tiotropium) at M1-AChR. All graphical presentations of the docked complexes were analysed using BIOVIA discovery studio visualizer.
| Ligand | Hydrogen bond (HB) interaction | Bond length (Å) for HB interaction | Hydrophobic interaction | Pi–cation interaction | Pi–sigma interaction | Pi–alkyl interaction | Pi–sulfur interaction |
|---|---|---|---|---|---|---|---|
| Iperoxo | Ser109 | 2.9 | Tyr404 | Tyr404 (4.4 Å) | Tyr404 (3.5 Å) | — | — |
| Tyr106 | |||||||
| Tyr381 | |||||||
| Trp378 | |||||||
| 77-LH-28-1 | Asp105 | 1.9 | Cys407 | Tyr404 (4.2 Å) | — | Tyr381 (4.8 Å) | — |
| Ser109 | Trp378 (4.6 Å) | ||||||
| Tyr82 | |||||||
| Tyr106 | |||||||
| Tyr381 | |||||||
| Tyr404 | |||||||
| Trp378 | |||||||
| Atropine | Asn382 | 2.4 | Ala196 | Trp378 (4.3 Å) | — | Ala196 (3.7 Å) | — |
| Ser109 | 3.1 | Ser109 | Val113 (5.4 Å) | ||||
| Tyr106 | |||||||
| Tyr381 | |||||||
| Tyr404 | |||||||
| Val113 | |||||||
| Tiotropium | Asn382 | 2 | Ala193 | Tyr404 (4 Å) | Tyr381 (3.7 Å) | Ala193 (4.6 Å) | Phe197 (5.9 Å) |
| Ala196 | Tyr404 (3.4 Å) | Ala196 (3.6 Å) | Tyr381 (5.3 Å) | ||||
| Tyr106 | Trp378 (5 Å) | ||||||
| Tyr381 | |||||||
| Tyr404 |