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. Author manuscript; available in PMC: 2025 Mar 8.
Published in final edited form as: Med. 2024 Feb 28;5(3):254–270.e8. doi: 10.1016/j.medj.2024.02.002

Key resources table

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rat Anti-mouse CD45-PercP (30-F11) BioLegend Cat# 103130; RRID AB_893339
Rat Anti-mouse CD3-BUV805 (17A2) BD Biosciences Cat# 569192; RRID AB_2871285
Rat Anti-mouse CD4-BUV496 (GK1.5) BD Biosciences Cat# 612952; RRID AB_2813886
Rat Anti-mouse CD8-BB515 (53–6.7) BD Biosciences Cat# 564422; RRID AB_2738801
Mouse Anti-Mouse Tbet-BUV421 (4B10) BioLegend Cat# 644816; RRID AB_10959653
Rat Anti-mouse IL-2-AF700 (JES6-5H4) BioLegend Cat# 503818; RRID AB_528931
Rat Anti-mouse IFNγ-BUV737 (XMG1.2) BD Biosciences Cat# 612769; RRID AB_2870098
Rat Anti-mouse Foxp3-AF532 (FJK-16s) ThermoFischer Cat# 58-5773-82; RRID AB_11218870
Hamster Anti-mouse CD279(PD-1)-BUV615 (J43) BD Biosciences Cat# 752299; RRID AB_2875816
Purified anti-mouse CD16/CD32 FC Shield (clone 2.4G2) Tonbo Biosciences Cat#: 70-0161-M001, RRID: N/A
Rabbit Anti-mouse CGRP Invitrogen Cat# PA5-114929; RRID AB_2899565
Chicken Anti-mouse NF-H Invitrogen Cat# PA1-10002; RRID AB_1077155
Rabbit Anti-mouse TRPV1 Alomone Labs Cat# ACC-030-200UL
Mouse Anti-mouse ChAT Invitrogen Cat# MA5-31383; RRID AB_2787020
Goat Anti-mouse IgG (H+L) highly cross-adsorbed AF Plus 488 Invitrogen Cat# A-11055; RRID AB_2534102
Goat Anti-rabbit IgG (H+L) cross-adsorbed AF Plus 647 Invitrogen Cat# A32733; RRID AB_2633282
Goat Anti-chicken IgY (H+L) AF 647 Invitrogen Cat# A-21449; RRID AB_2535866
InVivoMab Anti-mouse CD3 BioXCell Cat# BE0002
InVivoMab Anti-mouse CD28 BioXCell Cat# BE0015-1
Biological samples
Human HNSCC – isolated nerves University of California Los Angeles Collected per COMIRB-11-002858
Human HNSCC – tumor tissue University of Colorado Clinical Trials.gov NCT03635164
Chemicals, peptides, and recombinant proteins
Fetal Bovine Serum Gibco Cat# 10437028
RPMI 160 Medium Gibco Cat# 11875-093
DMEM/F-12 Gibco Cat# 10565042
Primocin InvivoGen Cat# ant-pm-05
Fungin InvivoGen Cat# ant-fn-1
BIBN4096 Tocris Cat# 4561
pLVX-puro-cOVA-IRES-BFP plasmid Addgene Plasmid #135074
psPAX2 plasmid Addgene Plasmid #12260
pMD2.G plasmid Addgene Plasmid #12259
Puromycin Invivogen Cat# ant-pr-1
Matrigel BD Biosciences Cat# 05850
Brilliant Stain Buffer BD Biosciences Cat# 563794
Trypsin Inhibitor, Soybean Purified, AOF Worthington Biochemical Corporation Cat# LS003571
Collagenase Type III Worthington Biochemical Corporation Cat# LS004182
eBioscience 1X RBC Lysis Buffer Invitrogen Ref# 00-4333-57
eBioscience FOXP3/Transcription Factor Fixation/Permeabilization Invitrogen Ref# 00-5521-00
Live/Dead Aqua Fixable Viability Dye Invitrogen Cat#: L34966
Calcein, AM Invitrogen Cat#: C3099
DAPI Fluoromount-G® SouthernBiotech Cat# 0100-20
CryoStor CS10 STEMCELL Cat# 07931
Xylene Fischer Scientific REF#X3P-1GAL
Vector Unmasking Solution Vector Laboratories REF#H-3300
TWEEN Sigma-Aldrich LOT#SLCB6677
Bovine Albumin Serum Fraction V Sigma-Aldrich REF#03116956001
Critical commercial assays
EasySep Mouse CD8+ T cell isolation kit StemCell Technologies Cat#: 19853
Mouse CGRP-I ELISA EIA Kit RayBiotech Code: EIAM-CGRP-1
CGRP Phenix Pharmaceuticals Cat# 015-09
Mouse IFNγ Single-Color ELISPOT ImmunoSpot
Deposited data
Human RNA Sequencing Data Darragh et al.

https://doi.org/10.1038/s43018-022-00450-6
GEO: GSE210287
Human Nerve Proteomics Data This paper Supplemental File.
Experimental models: Cell lines
MOC2 Provided by R. Uppaluri RRID: CVCL_ZD38
LY2 Provided by Nadarajah Vigneswaran RRID: CVCL_Z594
P029 Provided by X.J. Wang N/A
HEK293-FT cells Provided by Molishree Joshi
Experimental models: Organisms/strains
Mouse: C57BL/6J Jackson Laboratories Strain Code: 000664
Mouse: Balb/C Charles River Strain Code: 028
Mouse: TRPV1 KO Jackson Laboratories Strian Code: 003770
Software and algorithms
Flowjo (v10.8.1) BD Bioscience https://www.flowjo.com
Grahpad Prism (v9.1.0) Dotmatics https://www.graphpad.com
Biorender Biorender.com
R (v.4.2.3 and v. 4.2.1) R Foundation for Statistical Computing
clusterProfiler (v.4.6.2 and 4.4.4) Wu, T. et al. clusterProfiler 4.0: A universal enrichment tool for interpreting omics data. Innovation (Camb) 2, 100141 (2021).
ComplexHeatmap (v.2.14.0 and v.2.12.1) Gu, Z., Eils, R. & Schlesner, M. Complex heatmaps reveal patterns and correlations in multidimensional genomic data. Bioinformatics (Oxford, England) 32, 2847-2849 (2016).
Metaboanalyst 5.01 https://www.metaboanalyst.ca/