Table 3.
Candidate reference genes ranked by BestKeeper. α-EF: α-Elongation factor; His: Histone; UBC: Ubiquitin conjugating enzyme; 18S: 18S rRNA; GAPDH: Glyceraldehyde 3-phosphate dehydrogenase.
| Ranking | All samples | Samples of wounded stems at different times | Samples of different organs | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Candidate reference genes | SD | CVa | rb | Candidate reference genes | SD | CV | r | Candidate reference genes | SD | CV | r | |
| 1 | 18S | 0.41 | 1.76 | 0.581 | 18S | 0.56 | 2.41 | 0.614 | 18S | 0.12 | 0.50 | 0.758 |
| 2 | α-EF | 0.52 | 3.22 | 0.824 | α-EF | 0.65 | 4.08 | 0.888 | α-EF | 0.24 | 1.45 | 0.969 |
| 3 | Actin | 0.69 | 3.10 | 0.897 | UBC | 0.74 | 3.52 | 0.962 | β-tubulin | 0.42 | 1.80 | 0.849 |
| 4 | β-tubulin | 0.69 | 3.03 | 0.876 | β-tubulin | 0.74 | 3.30 | 0.950 | Actin | 0.59 | 2.61 | 0.928 |
| 5 | UBC | 0.90 | 4.18 | 0.801 | GAPDH | 0.82 | 3.60 | 0.853 | UBC | 0.81 | 3.66 | 0.651 |
| 6 | His | 1.07 | 4.51 | 0.940 | Actin | 0.88 | 3.95 | 0.929 | His | 1.29 | 5.38 | 0.938 |
| 7 | GAPDH | 1.56 | 7.03 | 0.776 | His | 0.99 | 4.14 | 0.983 | GAPDH | 2.59 | 11.65 | 0.975 |
acoefficient of variation, indicates the degree of data dispersion. The larger the CV value is, the more discrete the data. bcorrelation coefficient, indicates the correlation between variables. The larger the absolute value of r is, the greater the correlation.