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[Preprint]. 2024 Mar 7:2024.03.05.583631. [Version 1] doi: 10.1101/2024.03.05.583631

Table 1:

Model physical and computational parameters

Parameter Symbol Value
Physical parameters
Cell radius 𝓡c 5μm
Average cell division age 𝓟mat 18 min
Number of neighbors for overcrowding 𝓝max 5 cells
Cell neighborhood radius 𝓡N 15μm
Cell-cell repulsive spring stiffness kc 50μg/μms2
Vessel radius 𝓡v 10μm
Cell-vessel repulsive spring stiffness kv 100μg/μms2
Medium viscosity v 250μg/μms
Time of drug injection 𝓝inj 250 min
Drug influx from the vessel 𝓙γ 5σg/μm3s
Drug diffusion coefficient 𝓓γ 10μm2/s
Drug uptake rate 𝓤γ 0.015s1
Cell sensing radius 𝓡γ 3μm
Drug level for cell killing 𝓠thr 4σg/μm3
Probability parameters
Probability of mutation 𝓟mut 0.05 or 0.005
Probability of random death 𝓟die 0.8
Probability of drug induced death 𝓟𝓠die 0.85
Computational Parameters
Domain size Ω -100,1002μm
Grid width hg 5μm
Time step Δt 0.25s
Number of iterations Ntotal 100,000
Scaling parameter σ 10−19