Table 2.
Alleles with differences in the non-coding (5′ UTR/introns/3′ UTR) sequences compared to the reference allele
| HLA allele | Compared to | Differences in non-coding regions | Comment |
|---|---|---|---|
| A*03:182 | A*03:01:01:01 | I6 C2605T | Not unique for A*03 |
| B*18:34 | B*18:01:01:01 | I3 T1127C, I5 A2180G, 3' UTR T3014C, C3358T, C3472T, C3609T | No differences with B*18:01:01:02 |
| B*53:06 | B*53:01:01:01 | 10 differencesa | Possible recombination |
| C*03:04:19 | C*03:04:01:01 | I3 G1030A | Possible recombination |
| C*16:201 | C*16:01:01:01 | 5’ UTR G-415A | Unique for C*16 |
| DQA1*01:06 | DQA1*01:01:01:01 | Many differencesb | Possible recombination |
| DQA1*04:04 | DQA1*04:01:01:01 | 3205 Ins A | homopolymer |
| DQB1*03:114 | DQB1*03:01:01:01 | I1 C744T, I2 G3363A | Not unique for DQB1*03 |
| DQB1*06:03:11 | DQB1*06:01:01:01 | > 300 differences | No differences with DQB1*06:03:01:01 |
| DQB1*06:73 | DQB1*06:01:01:01 | > 300 differences | No differences with DQB1*06:02:01:01 |
| DQB1*06:286 | DQB1*06:01:01:01 | > 300 differences | No differences with DQB1*06:02:01:01 |
| DPA1*01:03:14 | DPA1*01:03:01:01 | I1 G1723A, I1 C3318G, I2 G4149C | Not unique for DPA1*01 |