Table 1. Summary of data resources providing access to datasets described in this manuscript.
All datasets described in this manuscript are freely accessible in the form of interactive web apps and downloadable R/Bioconductor objects.
| Resource | Data | Format | Link |
|---|---|---|---|
| Shiny (Chang et al., 2019) web app | Visium SRT | Interactive web app | https://libd.shinyapps.io/locus-c_Visium/ |
| iSEE (Rue-Albrecht et al., 2018) web app | snRNA-seq | Interactive web app | https://libd.shinyapps.io/locus-c_snRNA-seq/ |
| R/Bioconductor ExperimentHub data package | Visium SRT and snRNA-seq | Downloadable R/Bioconductor objects in SpatialExperiment (Righelli et al., 2022) and SingleCellExperiment (Amezquita et al., 2020) formats | https://bioconductor.org/packages/WeberDivechaLCdata |