Table 3.
Genera with their relative abundance confidently linked with HIV status (without an effect of iron status) with their percentage change due to HIV status (mean and standard deviation from the probabilistic model) and the 94% highest density interval.
| Genus | Relative abundance in children with no HIV or ID (per 10,000 reads) | Relative increase or decrease in abundance when HIV+ (%) | Highest density interval |
|---|---|---|---|
| More abundant in HIV+ | |||
| Butyricimonas | 9.5 | 67 | 52–81 |
| Sutterella | 13.2 | 102 | 87–116 |
| Desulfomicrobium | 7.2 | 105 | 85–124 |
| Bacteroides | 309.7 | 112 | 109–115 |
| Alistipes | 42.7 | 130 | 121–139 |
| Clostridium_XlVb | 8.5 | 144 | 123–165 |
| Barnesiella | 14.3 | 150 | 134–167 |
| Desulfovibrio | 19.0 | 154 | 140–169 |
| Parabacteroides | 52.0 | 160 | 151–169 |
| Clostridium_XVIII | 16.2 | 180 | 163–197 |
| Bilophila | 4.5 | 202 | 168–237 |
| Phascolarctobacterium | 12.8 | 236 | 213–258 |
| Subdoligranulum | 1.5 | 253 | 189–324 |
| Odoribacter | 8.4 | 263 | 233–295 |
| Fusobacterium | 0.6 | 10,993 | 8108–14,058 |
| Less abundant in HIV+ | |||
| Turicibacter | 25.6 | 81 | 80–83 |
| Romboutsia | 37.3 | 71 | 69–73 |
| Intestinibacter | 18.2 | 63 | 60–67 |
| Clostridium_sensu_stricto | 58.0 | 57 | 55–59 |
| Terrisporobacter | 7.4 | 56 | 50–62 |
| Olsenella | 55.0 | 56 | 54–58 |
| Dialister | 208.2 | 55 | 54–56 |
| Bifidobacterium | 615.9 | 49 | 48–50 |
| Roseburia | 694.1 | 25 | 24–26 |
| Dorea | 264.2 | 17 | 16–19 |
| Faecalibacterium | 1437.8 | 16 | 16–17 |