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. Author manuscript; available in PMC: 2024 Mar 18.
Published in final edited form as: Biol Psychiatry. 2020 Jan 22;88(3):236–247. doi: 10.1016/j.biopsych.2020.01.005

KEY RESOURCES TABLE

Resource Type Specific Reagent or Resource Source or Reference Identifiers Additional Information
Add additional rows as needed for each resource type Include species and sex when applicable. Include name of manufacturer, company, repository, individual, or research lab. Include PMID or DOI for references; use “this paper” if new. Include catalog numbers, stock numbers, database IDs or accession numbers, and/or RRIDs. RRIDs are highly encouraged; search for RRIDs at https://scicrunch.org/resources. Include any additional information or notes if necessary.
Biological Sample patients with schizophrenia and control group This paper
Cell Line 255 Cultured Neural progenitor cells derived from Olfactory Neuroepithelium This paper primary
Chemical Compound or Drug Matrigel basement membrane BD Bioscience cat. 354234
Chemical Compound or Drug Coon’s medium Sigma cat. F6636–10L
Chemical Compound or Drug Dispase BD Bioscience cat. 354235
Chemical Compound or Drug Leibovitz’s L-15 Medium (1X), liquid Invitrogen 11415–064
Chemical Compound or Drug Bovine Pituitary Extract Gibco 13028–014
Chemical Compound or Drug antibiotic–antimycotic Gibco 15240–096
Chemical Compound or Drug Human transferrin Gibco 0030124SA
Chemical Compound or Drug Sodium Selenite Sigma S9133–1MG
Chemical Compound or Drug Nutrient Mixture F-12 Ham, Coon's Modification Sigma F6636–10L
Chemical Compound or Drug hydrocortisone Sigma H0135
Chemical Compound or Drug Thyroxine Sigma T0397
Chemical Compound or Drug antibiotic–antimycotic Gibco 15240–096
Chemical Compound or Drug Endothelial Cell Growth Supplement Millipore 02–102
Chemical Compound or Drug Fetal Bovine Serum USDA KSE Scientific N/A
Commercial Assay Or Kit TruSeq Stranded Total RNA LT Library preparation kits with Ribo-Zero Gold Illumina, Inc. cat. RS-122–2301 and RS-122–2302
Commercial Assay Or Kit Direct-Zol RNA MiniPrep kit Zymo Research R2051
Commercial Assay Or Kit KAPA Library Quantification Kit Kapa Biosystems KK4824
Deposited Data; Public Database BrainSpan database www.brainspan.org DOI: 10.1126/science.aat7615
Deposited Data; Public Database Gencode https://www.gencodegenes.org/human/release_22.html v22
Genetic Reagent
Organism/Strain
Recombinant DNA
Sequence-Based Reagent
Software; Algorithm HTSeq Python package https://doi.org/10.1093/bioinformatics/btp120; https://doi.org/10.1093/bioinformatics/btu638 RRID:SCR_005514
Software; Algorithm DESeq2 http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html v1.16.1 doi: 10.1186/s13059-014-0550-8
Software; Algorithm GT-FAR https://genomics.isi.edu/gtfar v12
Software; Algorithm SVA (R package) available at: http://www.bioconductor.org v3.24.4 doi: 10.1093/bioinformatics/bts034
Software; Algorithm WGCNA (R package) available at: http://www.bioconductor.org https://horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/#cranInstall