Table 2.
Expression of nine genes compared between the CSP and CNSP groups.
| Gene name | All | Normal | Tumor | ||||||
|---|---|---|---|---|---|---|---|---|---|
| p value | Mean LFC | Std LFC | p value | Mean LFC | Std LFC | p value | Mean LFC | Std LFC | |
| AKT1 | 0.02 | 0.57 | 0.67 | 0.50 | 0.17 | 0.45 | 0.26 | 0.90 | 1.92 |
| AKT2 | 0.01 | 0.66 | 0.34 | 0.02 | 0.67 | 0.21 | 0.01 | 0.97 | 0.39 |
| AKT3 | 0.01 | 2.45 | 0.97 | 0.01 | 3.35 | 0.97 | 0.12 | 0.65 | 0.45 |
| PIK3CA | 0.04 | 0.76 | 0.76 | 0.09 | 0.80 | 0.56 | 0.23 | 1.56 | 0.96 |
| PIK3CB | 0.16 | 0.50 | 0.49 | 0.16 | 0.52 | 0.50 | 0.17 | 7.60 | 0.24 |
| PIK3CD | 0.34 | 0.46 | 1.41 | 0.53 | 0.51 | 1.90 | 0.16 | 0.73 | 0.71 |
| PIK3CG | 0.37 | 0.57 | 1.85 | 0.14 | 1.41 | 2.09 | 0.44 | 0.47 | 0.40 |
| PPARG | 0.01 | 1.45 | 1.66 | 0.010 | 2.00 | 0.31 | 0.49 | 0.41 | 0.80 |
| PTEN | 0.01 | 9.19 | 0.30 | 0.040 | 10.80 | 0.32 | 0.76 | -0.30 | 1.59 |
Note. “Normal” represents the comparison using normal tissue surrounding the tumor. “Tumor” represents comparison using data from tumor tissue. “All” represents using both normal and tumor tissue.