TABLE 2.

Summary of oligonucleotide hybridization data used to locate SalHV-1 genes

Results of SalHV-1 hybridization		Corresponding CCV gene
Oligonucleotide probea	Hybridizing SalHV-1 BamHI fragment	Gene	Size of ORF (bp)	Location in ORFb (bp)
GCAATAAACGCCTACTGTGCCCAAGGAGCA	S	25	1,494	1,240
TATACTATGATCAACACTGGTGCAGAGAGC	p	27	864	268
ACACGACGCCGCCATGCGTTACAATACACG	I	37	2,010	1,663
AAGAGGTTGTTTATCACCGTGGGATCTGTA	i	39	3,369	1159
CTGACCAACCAACTGACTCAAGCGGCTCTG	C	46	4,065	3,190
ATTGTCAGGGGGACCACCTACAGTTGTATA	Z	46	4,065	604
CACTGGGGTGATTGATTCGGACTATAAAGG	P	49	564	369
GGCTTCAGGGGAGCCATCTTCCGGAGATTG	A	54	1,821	1,003
CGAGGGGACTTTAAGATACAAGATATGGCA	a	56	3,537	2,131
CCGAAAACTGGCGAATTGTCATTTAGAGGT	t	56	3,537	106
AAAAGAGAGGCTGCATTTGACATAGAGACG	X	57	2,955	604
TGTCATGTTGGTAAAAAACAGGTATGTTGA	P	57	2,955	2,782
AAATTTCTCGCTCACGTTTTGGTTGACATG	P	58	1,797	988
TGTGTGGTGATTGAACTCAAGACATACAAG	A	60	1,179	655
ATACACCACTCAGACTTGGCTCACTTGGCT	A	60	1,179	717
AAGGTCCACTTTCTGTCTTCTAGTCCACTG	J	62	1,203	1,174
GCTATGCCGGATAAGTTTTCAGCACGCTAC	J	63	1,986	1,228
GCCCACCGGATCATCTGGTTTAAACACCTG	J	64	1,542	1,123
TTGGACCGAAACCATTACGAGCGGCTAGTG	J	65	4,302	4,192
TGTGATCCTGTGTATGTGGGTCCGCTCACA	c	65	4,302	2,068
GTGATTGATACAAGATTACTCTTTGGTTTA	H	67	4,668	3,235
TCGTCCCTGGGCGTTTGCACCTTTGCGATA	Q	69	558	508
GTATATGCTGCAGTATGTGCCGTGGAGATG	Q	70	681	337
ATACTTGCCCTCGAGGAAATGCCGATCACC	Q	71	795	1
TGCTGTGACATAATCCTATGTGACATTTGC	e	78	1,200	397

^aHybridization data are given for 30-bp regions of randomly derived SalHV-1 sequences whose predicted translation products are related to CCV proteins. The list proceeds rightward along the CCV genome. Sequences correspond to the noncoding (upper) strand. 

^bNucleotide in the CCV ORF which corresponds to the first residue of the oligonucleotide.