TABLE 2.
The information of the top 10 clusters ranked from the sum of 6D KDE difference value of sequences in each cluster
| Rank | CDRH3 length | Total number of sequences | Consensus amino acid sequence | Total number of mice detected | Number of infected mice detected | V and J combinations |
|---|---|---|---|---|---|---|
| 1 | 19 | 2,420 | CAREEVAYYSNYLYYFDYW | 1 | 1 | IGHV3-6/IGHJ2 |
| 2 | 15 | 865 | CARRRTAQATWFAYW | 2 | 2 | IGHV1-50/IGHJ3, IGHV1-18/IGHJ3 |
| 3 | 12 | 3,030 | CARRGYYAMDYW | 7 | 4 | IGHV2-6/IGHJ4, IGHV2-9-1/IGHJ4, IGHV4-1/IGHJ4, IGHV9-4/IGHJ4, IGHV9-3/IGHJ4, IGHV5-15/IGHJ4, IGHV3-6/IGHJ4, IGHV1-18/IGHJ4, IGHV10-3/IGHJ4, IGHV8-12/IGHJ4, IGHV10-3/IGHJ2, IGHV1-19/IGHJ4, IGHV1-26/IGHJ4, IGHV1-26/IGHJ3, IGHV8-8/IGHJ4, IGHV1-69/IGHJ4, IGHV1-15/IGHJ4, IGHV1-53/IGHJ4 |
| 4 | 13 | 2,305 | CARVNWDWYFDVW | 4 | 3 | IGHV8-8/IGHJ1, IGHV1-39/IGHJ1, IGHV1-82/IGHJ1, IGHV1-64/IGHJ1, IGHV7-1/IGHJ1 |
| 5 | 15 | 634 | CTLFITTVEGYFDVW | 1 | 1 | IGHV14-1/IGHJ1 |
| 6 | 11 | 1,155 | CARGNWYFDVW | 5 | 3 | IGHV8-12/IGHJ1, IGHV3-6/IGHJ1, IGHV1-82/IGHJ1, IGHV5-16/IGHJ1, IGHV1-52/IGHJ1 |
| 7 | 13 | 849 | CASQTAQVWFAYW | 1 | 1 | IGHV1-53/IGHJ3 |
| 8 | 11 | 627 | CARVWYAMDYW | 1 | 1 | IGHV5-16/IGHJ4 |
| 9 | 10 | 761 | CTMVTTGGYW | 1 | 1 | IGHV1-15/IGHJ2 |
| 10 | 17 | 1,058 | CARSGAYYSNHYAMDYW | 2 | 2 | IGHV1-42/IGHJ4, IGHV1-42/IGHJ2, IGHV1-39/IGHJ4 |