Table 4.
Diversity, frequency and main molecular features of Giardia duodenalis sequences at the bg locus generated in the present study
| Assemblage | Sub-assemblage | Isolates | Reference sequence | Stretch | Single nucleotide polymorphisms | Sample Id. |
|---|---|---|---|---|---|---|
| A | AII | 1 | AY072723 | 102‒604 | None | MT166353 |
| 1 | 98‒594 | C414Y | MT166354 | |||
| AIII | 6 | AY072724 | 98‒753 | None | MT166355 | |
| 1 | 98‒590 | G118Ka, A456R | MT166356 | |||
| 1 | 98‒592 | A332R | MT166357 | |||
| AII + AIII | 2 | AY072723 | 103‒603 | C415Y, T423Y | MT166358 | |
| B | ‒ | 3 | AY072727 | 98‒595 | None | MT166359 |
| ‒ | 1 | 98‒605 | C150Y, C165Y, C309T, C507Y | MT166360 | ||
| ‒ | 1 | 102‒594 | C165T | MT166361 | ||
| ‒ | 1 | 98‒713 | C165Y, A280Rb | MT166362 | ||
| ‒ | 1 | 98‒753 | C165Y, C309Y | MT166363 | ||
| ‒ | 1 | 141‒592 | A183R, C288Y, C309Y, T519Y | MT166364 | ||
| ‒ | 1 | 93‒604 | A183R, C309Y, C348Y | MT166365 | ||
| ‒ | 1 | 93‒753 | C309T | MT166366 | ||
| ‒ | 1 | 92‒711 | C309T, A652G | MT166367 |
K: A/T; R: A/G; Y: C/T.
a
If T, pD40Y.
b
If G, pT94A.
GenBank accession numbers are provided. Novel genotypes are shown underlined.